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    GA2OX4 gibberellin 2-oxidase 4 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841217, updated on 14-Nov-2024

    Summary

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    Official Symbol
    GA2OX4
    Official Full Name
    gibberellin 2-oxidase 4
    Primary source
    TAIR:AT1G47990
    Locus tag
    AT1G47990
    See related
    Araport:AT1G47990
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    Arabidopsis thaliana gibberellin 2-oxidase 4; ATGA2OX4; gibberellin 2-oxidase 4; T2J15.10; T2J15_10
    Summary
    Encodes a gibberellin 2-oxidase that acts on C19 gibberellins. AtGA2OX4 expression is responsive to cytokinin and KNOX activities.
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    Genomic context

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    See GA2OX4 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (17698598..17701041)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene desiccation-like protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene myb domain protein 112 Neighboring gene Plant invertase/pectin methylesterase inhibitor superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. KNOX action in Arabidopsis is mediated by coordinate regulation of cytokinin and gibberellin activities. Jasinski S, et al. Curr Biol, 2005 Sep 6. PMID 16139211
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_103695.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables gibberellin 2-beta-dioxygenase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in gibberellin biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within gibberellin catabolic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    gibberellin 2-oxidase 4
    NP_175233.1
    • gibberellin 2-oxidase 4 (GA2OX4); FUNCTIONS IN: C-19 gibberellin 2-beta-dioxygenase activity; INVOLVED IN: gibberellin catabolic process; LOCATED IN: membrane; EXPRESSED IN: shoot apical meristem, leaf primordium, leaf; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase 6 (TAIR:AT1G02400.1); Has 8433 Blast hits to 8393 proteins in 999 species: Archae - 0; Bacteria - 1145; Metazoa - 112; Fungi - 985; Plants - 4809; Viruses - 0; Other Eukaryotes - 1382 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      17698598..17701041
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103695.2 → NP_175233.1  gibberellin 2-oxidase 4 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175233.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9C7Z1
      UniProtKB/TrEMBL
      A0A178WBM9
      Conserved Domains (3) summary
      COG3491
      Location:13 → 309
      PcbC; Isopenicillin N synthase and related dioxygenases [Secondary metabolites biosynthesis, transport and catabolism]
      pfam03171
      Location:157 → 269
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily
      pfam14226
      Location:15 → 108
      DIOX_N; non-haem dioxygenase in morphine synthesis N-terminal
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9C7Z1.1

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