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    SNAP30 soluble N-ethylmaleimide-sensitive factor adaptor protein 30 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837948, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SNAP30
    Official Full Name
    soluble N-ethylmaleimide-sensitive factor adaptor protein 30
    Primary source
    TAIR:AT1G13890
    Locus tag
    AT1G13890
    See related
    Araport:AT1G13890
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATSNAP30; F16A14.10; F16A14_10; soluble N-ethylmaleimide-sensitive factor adaptor protein 30
    Summary
    Encodes a member of a gene family homologous to mammalian SNAP25, a type of SNARE proteins with two chains. There are three members in Arabidopsis: SNAP30, SNAP29, and SNAP33.
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    Genomic context

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    See SNAP30 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    6
    Sequence:
    Chromosome: 1; NC_003070.9 (4751432..4753018)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene KTI12-like, chromatin associated protein Neighboring gene ELM2 domain-containing protein Neighboring gene Purple acid phosphatases superfamily protein Neighboring gene Leucine-rich repeat (LRR) family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Functional characterization of the KNOLLE-interacting t-SNARE AtSNAP33 and its role in plant cytokinesis. Heese M, et al. J Cell Biol, 2001 Oct 15. PMID 11591731, Free PMC Article
    2. The Arabidopsis genome. An abundance of soluble N-ethylmaleimide-sensitive factor adaptor protein receptors. Sanderfoot AA, et al. Plant Physiol, 2000 Dec. PMID 11115874, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables SNAP receptor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within membrane fusion TAS
    Traceable Author Statement
    more info
    		 PubMed 
    acts_upstream_of_or_within vesicle-mediated transport TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of SNARE complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    soluble N-ethylmaleimide-sensitive factor adaptor protein 30
    NP_001318998.1
    • soluble N-ethylmaleimide-sensitive factor adaptor protein 30 (SNAP30); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: vesicle-mediated transport, cellular membrane fusion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, seedling growth, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727); BEST Arabidopsis thaliana protein match is: soluble N-ethylmaleimide-sensitive factor adaptor protein 33 (TAIR:AT5G61210.1); Has 915 Blast hits to 914 proteins in 177 species: Archae - 0; Bacteria - 2; Metazoa - 570; Fungi - 86; Plants - 163; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      4751432..4753018
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001332096.1 → NP_001318998.1  soluble N-ethylmaleimide-sensitive factor adaptor protein 30 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LMG8
      UniProtKB/TrEMBL
      A0A178WHU5, A0A5S9U9P0, A0A654E9H7
      Conserved Domains (2) summary
      cd15841
      Location:201 → 259
      SNARE_Qc; SNARE motif, subgroup Qc
      cd15861
      Location:68 → 132
      SNARE_SNAP25N_23N_29N_SEC9N; N-terminal SNARE motif of SNAP25, SNAP23, SNAP29, and SEC9

    2. NM_101255.2 → NP_172842.1  soluble N-ethylmaleimide-sensitive factor adaptor protein 30 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172842.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LMG8
      UniProtKB/TrEMBL
      A0A178WHU5, A0A5S9U9P0, A0A654E9H7
      Conserved Domains (2) summary
      cd15841
      Location:201 → 259
      SNARE_Qc; SNARE motif, subgroup Qc
      cd15861
      Location:68 → 132
      SNARE_SNAP25N_23N_29N_SEC9N; N-terminal SNARE motif of SNAP25, SNAP23, SNAP29, and SEC9
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LMG8.1

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