RPS2 ribosomal protein S2 [Arabidopsis thaliana (thale cress)] - Gene

Summary

Go to the top of the page Help

Official Symbol: RPS2
Official Full Name: ribosomal protein S2
Primary source: TAIR:AT3G03600
Locus tag: AT3G03600
See related: Araport:AT3G03600
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: ribosomal protein S2; T12J13.12; T12J13_12
Summary: Structural component of the mitochondrial ribosome small subunit
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help

See RPS2 in Genome Data Viewer

Location:: chromosome: 3

Exon count:: 1

Sequence:: Chromosome: 3; NC_003074.8 (867548..868706, complement)

Chromosome 3 - NC_003074.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:: NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

RPM1, RPS2 and RPS5 are R proteins. Here, we provide evidence that FLS2 is physically associated with all three R proteins.
Title: Physical association of pattern-triggered immunity (PTI) and effector-triggered immunity (ETI) immune receptors in Arabidopsis.
RPS2 contributes to defense-like symptoms induced when AvrRpm1 is conditionally expressed in plants lacking RPM1.
Title: The Pseudomonas syringae type III effector AvrRpm1 induces significant defenses by activating the Arabidopsis nucleotide-binding leucine-rich repeat protein RPS2.

Submit: New GeneRIF Correction

Interactions

Go to the top of the page Help

Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

Go to the top of the page Help

Homology

Orthologs from OrthoDB

NM_111231.4

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables structural constituent of ribosome	TAS Traceable Author Statement more info	PubMed

Process	Evidence Code	Pubs
acts_upstream_of_or_within translation	TAS Traceable Author Statement more info	PubMed

Component	Evidence Code	Pubs
located_in chloroplast	ISM Inferred from Sequence Model more info
part_of mitochondrial small ribosomal subunit	ISS Inferred from Sequence or Structural Similarity more info	PubMed

General protein information

Go to the top of the page Help

Preferred Names: ribosomal protein S2

NP_187010.1

ribosomal protein S2 (RPS2); CONTAINS InterPro DOMAIN/s: Ribosomal protein S2 (InterPro:IPR001865), Ribosomal protein S2, conserved site (InterPro:IPR018130), Ribosomal protein S2, bacteria/mitochondria/plastid (InterPro:IPR005706); Has 7651 Blast hits to 7651 proteins in 2699 species: Archae - 6; Bacteria - 5327; Metazoa - 160; Fungi - 127; Plants - 183; Viruses - 0; Other Eukaryotes - 1848 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003074.8 Reference assembly

Range

867548..868706 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_111231.4 → NP_187010.1 ribosomal protein S2 [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_187010.1

Status: REVIEWED

UniProtKB/Swiss-Prot

Q8LGB5, Q9GCB9, Q9SS62

UniProtKB/TrEMBL

A0A178VJ81, A0A384L231, Q0WU50

Conserved Domains (1) summary

cd01425
Location:11 → 194

RPS2; Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome. It has been shown that in Escherichia coli RPS2 is essential for the binding of ...