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    F-box and associated interaction domains-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816482, updated on 18-Sep-2024

    Summary

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    Official Full Name
    F-box and associated interaction domains-containing protein
    Primary source
    TAIR:AT2G19630
    Locus tag
    AT2G19630
    See related
    Araport:AT2G19630
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F3P11.23; F3P11_23
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (8490181..8491110, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene RING/U-box superfamily protein Neighboring gene N-MYC downregulated-like 3 Neighboring gene ncRNA Neighboring gene ASH1-related protein 2 Neighboring gene Cysteine/Histidine-rich C1 domain family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001124875.1
    NM_127521.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    F-box and associated interaction domains-containing protein
    NP_001118347.1
    • F-box and associated interaction domains-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 3 (InterPro:IPR013187), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT5G65850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_179553.1
    • F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 3 (InterPro:IPR013187), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT5G65850.1); Has 1237 Blast hits to 901 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1237; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      8490181..8491110 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001124875.1 → NP_001118347.1  F-box and associated interaction domains-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001118347.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2EBT1, B3H799
      Conserved Domains (2) summary
      pfam00646
      Location:15 → 59
      F-box; F-box domain
      pfam08268
      Location:74 → 176
      FBA_3; F-box associated domain

    2. NM_127521.1 → NP_179553.1  F-box and associated interaction domains-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179553.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9ZUN0
      UniProtKB/TrEMBL
      A0A178VU60, A0A5S9WZD9, A0A654EUB2
      Conserved Domains (2) summary
      pfam08268
      Location:132 → 255
      FBA_3; F-box associated domain
      pfam00646
      Location:15 → 56
      F-box; F-box domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9ZUN0.1

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