TPS12 terpenoid synthase 12 [Arabidopsis thaliana (thale cress)] - Gene

Summary

Official Symbol: TPS12
Official Full Name: terpenoid synthase 12
Primary source: TAIR:AT4G13280
Locus tag: AT4G13280
See related: Araport:AT4G13280
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: ATTPS12; T9E8.20; T9E8_20; terpenoid synthase 12
Summary: Catalyzes the conversion of farnesyl diphosphate to (Z)-gamma-bisabolene and the additional minor products E-nerolidol and alpha-bisabolol. Expressed in cortex and sub-epidermal layers of roots, leaf hydathodes and flower stigmata. Induced by wounding.
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Chromosome 4 - NC_003075.7 Genomic Context describing neighboring genes

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NM_001340846.1

NM_117401.2

Function	Evidence Code	Pubs
enables (Z)-gamma-bisabolene synthase activity	IEA Inferred from Electronic Annotation more info
enables cyclase activity	IDA Inferred from Direct Assay more info	PubMed
enables magnesium ion binding	IEA Inferred from Electronic Annotation more info
enables terpene synthase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in diterpenoid biosynthetic process	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within farnesyl diphosphate metabolic process	IDA Inferred from Direct Assay more info	PubMed
acts_upstream_of_or_within response to wounding	IEP Inferred from Expression Pattern more info	PubMed
acts_upstream_of_or_within sesquiterpenoid biosynthetic process	IDA Inferred from Direct Assay more info	PubMed

Component	Evidence Code	Pubs
located_in chloroplast	ISM Inferred from Sequence Model more info
located_in peroxisome	IDA Inferred from Direct Assay more info	PubMed

NP_193064.2

terpenoid synthase 12 (TPS12); FUNCTIONS IN: cyclase activity; INVOLVED IN: response to wounding, sesquiterpenoid biosynthetic process, farnesyl diphosphate metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: root cortex, stigma, hydathode; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpenoid synthase 13 (TAIR:AT4G13300.1); Has 1634 Blast hits to 1617 proteins in 174 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1630; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).

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