U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    PDV1 plastid division1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835409, updated on 18-Sep-2024

    Summary

    Official Symbol
    PDV1
    Official Full Name
    plastid division1
    Primary source
    TAIR:AT5G53280
    Locus tag
    AT5G53280
    See related
    Araport:AT5G53280
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    K19E1.8; K19E1_8; PLASTID DIVISION1
    Summary
    An integral outer envelope membrane protein (as its homolog PDV2), component of the plastid division machinery. Similar to ARC5, PDV1 localized to a discontinuous ring at the division site in wild-type plants. PDV1 and PDV2 are required for localization of ARC5 at the chloroplast division site. Topological analysis showed that the large N-terminal region of PDV1 upstream of the transmembrane helix bearing a putative coiled-coil domain is exposed to the cytosol. Mutation of the conserved PDV1 C-terminal Gly residue did not block PDV1 insertion into the outer envelope membrane but did abolish its localization to the division site.
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See PDV1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (21607410..21609428)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Seed maturation protein Neighboring gene Seed maturation protein Neighboring gene cytokinin response factor 3 Neighboring gene ubiquitin-conjugating enzyme 10

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_124707.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables phosphatidylinositol-4-phosphate binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within chloroplast fission IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in chloroplast fission IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in response to gibberellin IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in chloroplast outer membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    plastid division1
    NP_200140.1
    • PLASTID DIVISION1 (PDV1); BEST Arabidopsis thaliana protein match is: plastid division2 (TAIR:AT2G16070.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      21607410..21609428
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_124707.4NP_200140.1  plastid division1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200140.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LBC3, Q9FK13
      UniProtKB/TrEMBL
      A0A178UJ67, A0A5S9YEA4