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    Mitochondrial inner membrane translocase complex, subunit Tim44-related protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 5008229, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Mitochondrial inner membrane translocase complex, subunit Tim44-related protein
    Primary source
    TAIR:AT5G27395
    Locus tag
    AT5G27395
    See related
    Araport:AT5G27395
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    12
    Sequence:
    Chromosome: 5; NC_003076.8 (9671393..9674267, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene inactive Serine/Threonine-kinase, putative (DUF679) Neighboring gene glutathione synthetase 2 Neighboring gene tagatose-6-phosphate ketose/aldose isomerase, putative (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein) Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001085157.5
    NM_001125814.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Mitochondrial inner membrane translocase complex, subunit Tim44-related protein
    NP_001078626.1
    • Mitochondrial inner membrane translocase complex, subunit Tim44-related protein; FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport; LOCATED IN: mitochondrial inner membrane presequence translocase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim44-related (InterPro:IPR007379); Has 319 Blast hits to 319 proteins in 129 species: Archae - 0; Bacteria - 128; Metazoa - 91; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink).
    NP_001119286.1
    • Mitochondrial inner membrane translocase complex, subunit Tim44-related protein; FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport; LOCATED IN: mitochondrion, mitochondrial inner membrane presequence translocase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim44-related (InterPro:IPR007379); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      9671393..9674267 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001085157.5 → NP_001078626.1  Mitochondrial inner membrane translocase complex, subunit Tim44-related protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078626.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UQK0, A0A5S9Y7L1, Q8GXP7
      Conserved Domains (1) summary
      pfam04280
      Location:159 → 311
      Tim44; Tim44-like domain

    2. NM_001125814.1 → NP_001119286.1  Mitochondrial inner membrane translocase complex, subunit Tim44-related protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001119286.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UQK0, A0A5S9Y7L1, B3H4A1
      Conserved Domains (1) summary
      pfam04280
      Location:142 → 294
      Tim44; Tim44-like domain
    Nucleotide Protein
    Heading Accession and Version

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