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    Uncharacterized protein family (UPF0041) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827120, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Uncharacterized protein family (UPF0041)
    Primary source
    TAIR:AT4G14695
    Locus tag
    AT4G14695
    See related
    Araport:AT4G14695
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    6
    Sequence:
    Chromosome: 4; NC_003075.7 (8419570..8421070)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene chaperone ClpB1-like protein Neighboring gene Pseudouridine synthase/archaeosine transglycosylase-like family protein Neighboring gene Chlorophyll A-B binding family protein Neighboring gene ncRNA Neighboring gene origin recognition complex 1 Neighboring gene RmlC-like cupins superfamily protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. Heazlewood JL, et al. Plant Cell, 2004 Jan. PMID 14671022, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    NM_001084920.2
    NM_001340956.1
    NM_117552.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in mitochondrial pyruvate transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in mitochondrion HDA PubMed 

    General protein information

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    Preferred Names
    Uncharacterized protein family (UPF0041)
    NP_001078389.1
    • Uncharacterised protein family (UPF0041); INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0041 (InterPro:IPR005336); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0041) (TAIR:AT4G22310.1); Has 494 Blast hits to 494 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 213; Fungi - 128; Plants - 106; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink).
    NP_001319940.1
    • Uncharacterised protein family (UPF0041); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0041 (InterPro:IPR005336); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0041) (TAIR:AT4G22310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      8419570..8421070
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001340956.1 → NP_001319940.1  Uncharacterized protein family (UPF0041) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L7H8
      UniProtKB/TrEMBL
      A0A5S9XSC9, A0A654FPP2
      Conserved Domains (1) summary
      pfam03650
      Location:5 → 108
      MPC; Uncharacterized protein family (UPF0041)

    2. NM_117552.4 → NP_567439.1  Uncharacterized protein family (UPF0041) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567439.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L7H8
      UniProtKB/TrEMBL
      A0A5S9XSC9, A0A654FPP2
      Conserved Domains (1) summary
      pfam03650
      Location:5 → 108
      MPC; Uncharacterized protein family (UPF0041)

    3. NM_001084920.2 → NP_001078389.1  Uncharacterized protein family (UPF0041) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078389.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8MQ95
      Conserved Domains (1) summary
      pfam03650
      Location:5 → 90
      MPC; uncharacterized protein family (UPF0041)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8L7H8.1

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