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    piezo-type mechanosensitive ion channel component [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819418, updated on 18-Sep-2024

    Summary

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    Official Full Name
    piezo-type mechanosensitive ion channel component
    Primary source
    TAIR:AT2G48060
    Locus tag
    AT2G48060
    See related
    Araport:AT2G48060
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T9J23.21
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    21
    Sequence:
    Chromosome: 2; NC_003071.7 (19651108..19662723, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Major facilitator superfamily protein Neighboring gene DNAse I-like superfamily protein Neighboring gene uncharacterized protein Neighboring gene resistance to phytophthora 1 Neighboring gene oxidoreductase, 2OG-Fe(II) oxygenase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Plant PIEZO homologs modulate vacuole morphology during tip growth. Radin I, et al. Science, 2021 Jul 30. PMID 34326243
    2. Evidence for the involvement of AtPiezo in mechanical responses. Fang X, et al. Plant Signal Behav, 2021 May 4. PMID 33591222, Free PMC Article
    3. AtPiezo Plays an Important Role in Root Cap Mechanotransduction. Fang X, et al. Int J Mol Sci, 2021 Jan 5. PMID 33466520, Free PMC Article
    4. Genetic analysis of a Piezo-like protein suppressing systemic movement of plant viruses in Arabidopsis thaliana. Zhang Z, et al. Sci Rep, 2019 Feb 28. PMID 30816193, Free PMC Article
    5. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Evidence for the involvement of AtPiezo in mechanical responses.
      Title: Evidence for the involvement of AtPiezo in mechanical responses.
    2. Plant PIEZO homologs modulate vacuole morphology during tip growth.
      Title: Plant PIEZO homologs modulate vacuole morphology during tip growth.
    3. Genetic analysis of a Piezo-like protein suppressing systemic movement of plant viruses in Arabidopsis thaliana.
      Title: Genetic analysis of a Piezo-like protein suppressing systemic movement of plant viruses in Arabidopsis thaliana.
    Submit: New GeneRIF Correction

    General gene information

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    NM_001337291.1
    NM_130373.6

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables mechanosensitive monoatomic ion channel activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within detection of mechanical stimulus IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    piezo-type mechanosensitive ion channel component
    NP_182327.6
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: shoot, sperm cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341 proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa - 318; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      19651108..19662723 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001337290.1 → NP_001323909.1  piezo-type mechanosensitive ion channel component [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VQS1, A0A1P8AYL8, A0A5S9X8H3

    2. NM_130373.6 → NP_182327.6  piezo-type mechanosensitive ion channel component [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_182327.6

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4IN58, Q9ZU83, Q9ZU84, Q9ZU85
      UniProtKB/TrEMBL
      A0A654F838
      Conserved Domains (2) summary
      pfam12166
      Location:2066 → 2457
      Piezo_RRas_bdg; Piezo non-specific cation channel, R-Ras-binding domain
      cl20817
      Location:1340 → 1397
      GBP_C; Guanylate-binding protein, C-terminal domain

    3. NM_001337291.1 → NP_001323908.1  piezo-type mechanosensitive ion channel component [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AYH1, A0A654F838
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4IN58.1

    Gene LinkOut

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