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    trimethylguanosine synthase (DUF707) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817377, updated on 18-Sep-2024

    Summary

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    Official Full Name
    trimethylguanosine synthase (DUF707)
    Primary source
    TAIR:AT2G28310
    Locus tag
    AT2G28310
    See related
    Araport:AT2G28310
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T1B3.17
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    13
    Sequence:
    Chromosome: 2; NC_003071.7 (12085356..12088121)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene Putative lysine decarboxylase family protein Neighboring gene Nucleotide/sugar transporter family protein Neighboring gene Pleckstrin homology (PH) and lipid-binding START domains-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Separating Golgi Proteins from Cis to Trans Reveals Underlying Properties of Cisternal Localization. Parsons HT, et al. Plant Cell, 2019 Sep. PMID 31266899, Free PMC Article
    2. Isolation and proteomic characterization of the Arabidopsis Golgi defines functional and novel components involved in plant cell wall biosynthesis. Parsons HT, et al. Plant Physiol, 2012 May. PMID 22430844, Free PMC Article
    3. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
    4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001161065.1
    NM_179787.4
    NM_179788.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables glycosyltransferase activity ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus HDA PubMed 
    located_in Golgi trans cisterna HDA PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in endosome HDA PubMed 
    located_in trans-Golgi network HDA PubMed 

    General protein information

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    Preferred Names
    trimethylguanosine synthase (DUF707)
    NP_001154537.1
    • Protein of unknown function (DUF707); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT1G08040.2); Has 326 Blast hits to 325 proteins in 27 species: Archae - 0; Bacteria - 15; Metazoa - 0; Fungi - 0; Plants - 305; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
    NP_850118.1
    • Protein of unknown function (DUF707); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT1G08040.2); Has 326 Blast hits to 325 proteins in 27 species: Archae - 0; Bacteria - 15; Metazoa - 0; Fungi - 0; Plants - 305; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
    NP_850119.1
    • Protein of unknown function (DUF707); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT1G08040.2); Has 326 Blast hits to 325 proteins in 27 species: Archae - 0; Bacteria - 15; Metazoa - 0; Fungi - 0; Plants - 305; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      12085356..12088121
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_179787.4 → NP_850118.1  trimethylguanosine synthase (DUF707) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850118.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VYQ7, Q56Y17, Q9SKN9
      Conserved Domains (1) summary
      pfam05212
      Location:78 → 365
      DUF707; Protein of unknown function (DUF707)

    2. NM_179788.2 → NP_850119.1  trimethylguanosine synthase (DUF707) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850119.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VYQ7, Q56Y17, Q9SKN9
      Conserved Domains (1) summary
      pfam05212
      Location:78 → 365
      DUF707; Protein of unknown function (DUF707)

    3. NM_001161065.1 → NP_001154537.1  trimethylguanosine synthase (DUF707) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001154537.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VYQ7, Q56Y17, Q9SKN9
      Conserved Domains (1) summary
      pfam05212
      Location:78 → 365
      DUF707; Protein of unknown function (DUF707)
    Nucleotide Protein
    Heading Accession and Version

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