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    phosphoinositide binding protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842458, updated on 18-Sep-2024

    Summary

    Official Full Name
    phosphoinositide binding protein
    Primary source
    TAIR:AT1G61620
    Locus tag
    AT1G61620
    See related
    Araport:AT1G61620
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    COP1 SUPPRESSOR 1; CSU1; T25B24.3; T25B24_3
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    Genomic context

    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (22737475..22739443)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene DUF1262 family protein (DUF1262) Neighboring gene S-locus lectin protein kinase family protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

    Interactions

    General gene information

    NM_104844.3

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in nuclear speck PubMed 
    located_in nucleus  

    General protein information

    Preferred Names
    phosphoinositide binding protein
    NP_564781.1
    • phosphoinositide binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Nitric oxide synthase-interacting (InterPro:IPR016818), Zinc finger, RING-type (InterPro:IPR001841); Has 510 Blast hits to 510 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 167; Fungi - 129; Plants - 138; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      22737475..22739443
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_104844.3 → NP_564781.1  phosphoinositide binding protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564781.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8GZ68, Q9SY88
      UniProtKB/TrEMBL
      A0A178WN49, A0A5S9WNN1, A0A654ELK5
      Conserved Domains (3) summary
      COG5222
      Location:78 → 301
      COG5222; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
      pfam15906
      Location:5 → 75
      zf-NOSIP; Zinc-finger of nitric oxide synthase-interacting protein
      cd16513
      Location:221 → 263
      RING1-HC_LONFs; RING finger 1, HC subclass, found in the LON peptidase N-terminal domain and RING finger proteins family
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