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    CIPK16 CBL-interacting protein kinase 16 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817047, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CIPK16
    Official Full Name
    CBL-interacting protein kinase 16
    Primary source
    TAIR:AT2G25090
    Locus tag
    AT2G25090
    See related
    Araport:AT2G25090
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtCIPK16; CBL-interacting protein kinase 16; F13D4.161; F13D4_161; SNF1-RELATED PROTEIN KINASE 3.18; SnRK3.18
    Summary
    Encodes a member of the SNF1-related kinase (SnRK) gene family (SnRK3.18), which has also been reported as a member of the CBL-interacting protein kinases (CIPK16) and is involved in salinity tolerance.
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    Genomic context

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    See CIPK16 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (10670410..10672892, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene glutathione peroxidase 1 Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A novel protein kinase involved in Na(+) exclusion revealed from positional cloning. Roy SJ, et al. Plant Cell Environ, 2013 Mar. PMID 22897323
    2. A protein phosphorylation/dephosphorylation network regulates a plant potassium channel. Lee SC, et al. Proc Natl Acad Sci U S A, 2007 Oct 2. PMID 17898163, Free PMC Article
    3. Calcium sensors and their interacting protein kinases: genomics of the Arabidopsis and rice CBL-CIPK signaling networks. Kolukisaoglu U, et al. Plant Physiol, 2004 Jan. PMID 14730064, Free PMC Article
    4. Mechanistic analysis of AKT1 regulation by the CBL-CIPK-PP2CA interactions. Lan WZ, et al. Mol Plant, 2011 May. PMID 21596690
    5. Comprehensive structural, interaction and expression analysis of CBL and CIPK complement during abiotic stresses and development in rice. Kanwar P, et al. Cell Calcium, 2014 Aug. PMID 24970010

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. overexpression increases salinity tolerance
      Title: A novel protein kinase involved in Na(+) exclusion revealed from positional cloning.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_128066.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within hyperosmotic salinity response IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within sodium ion transport IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    CBL-interacting protein kinase 16
    NP_180081.1
    • CBL-interacting protein kinase 16 (CIPK16); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; EXPRESSED IN: stem, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 5 (TAIR:AT5G10930.1); Has 131103 Blast hits to 128839 proteins in 4426 species: Archae - 199; Bacteria - 15263; Metazoa - 48327; Fungi - 13205; Plants - 31908; Viruses - 544; Other Eukaryotes - 21657 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      10670410..10672892 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128066.4 → NP_180081.1  CBL-interacting protein kinase 16 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180081.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SEZ7
      UniProtKB/TrEMBL
      A0A178W078, A0A5S9X160
      Conserved Domains (2) summary
      cd12195
      Location:323 → 437
      CIPK_C; C-terminal regulatory domain of Calcineurin B-Like (CBL)-interacting protein kinases
      cl21453
      Location:14 → 277
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SEZ7.1

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