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    Alkaline-phosphatase-like family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816786, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Alkaline-phosphatase-like family protein
    Primary source
    TAIR:AT2G22530
    Locus tag
    AT2G22530
    See related
    Araport:AT2G22530
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F14M13.7; F14M13_7
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    17
    Sequence:
    Chromosome: 2; NC_003071.7 (9572768..9577616, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene uncoupling protein 5 Neighboring gene hydroxyproline-rich glycoprotein family protein Neighboring gene uncharacterized protein Neighboring gene K-box region and MADS-box transcription factor family protein Neighboring gene Kinase interacting (KIP1-like) family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_127819.6

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables mannose-ethanolamine phosphotransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in GPI anchor biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in endoplasmic reticulum HDA PubMed 
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Alkaline-phosphatase-like family protein
    NP_179839.5
    • Alkaline-phosphatase-like family protein; FUNCTIONS IN: transferase activity, catalytic activity; INVOLVED IN: metabolic process, phospholipid biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Alkaline phosphatase-like, alpha/beta/alpha (InterPro:IPR017849), Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase (InterPro:IPR002591), Alkaline-phosphatase-like, core domain (InterPro:IPR017850); BEST Arabidopsis thaliana protein match is: Alkaline-phosphatase-like family protein (TAIR:AT5G17250.1); Has 1578 Blast hits to 1403 proteins in 374 species: Archae - 4; Bacteria - 326; Metazoa - 515; Fungi - 456; Plants - 91; Viruses - 0; Other Eukaryotes - 186 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      9572768..9577616 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127819.6 → NP_179839.5  Alkaline-phosphatase-like family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179839.5

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VTW9, F4IJJ8
      Conserved Domains (1) summary
      cd16024
      Location:82 → 362
      GPI_EPT_2; GPI ethanolamine phosphate transferase 2; PIG-G
    Nucleotide Protein
    Heading Accession and Version

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