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    Membrane fusion protein Use1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841850, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Membrane fusion protein Use1
    Primary source
    TAIR:AT1G54110
    Locus tag
    AT1G54110
    See related
    Araport:AT1G54110
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F15I1.20
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    8
    Sequence:
    Chromosome: 1; NC_003070.9 (20199310..20201787)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene DUF1677 family protein, putative (DUF1677) Neighboring gene aldehyde dehydrogenase 7B4 Neighboring gene cation calcium exchanger 4 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001333630.1
    NM_001333631.1
    NM_104288.3

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Membrane fusion protein Use1
    NP_564649.1
    • Membrane fusion protein Use1; CONTAINS InterPro DOMAIN/s: Vesicle transport protein, Use1 (InterPro:IPR019150); BEST Arabidopsis thaliana protein match is: Membrane fusion protein Use1 (TAIR:AT3G55600.1); Has 213 Blast hits to 213 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 103; Fungi - 15; Plants - 83; Viruses - 3; Other Eukaryotes - 9 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      20199310..20201787
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_104288.3 → NP_564649.1  Membrane fusion protein Use1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564649.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WII8, A0A5S9WLQ0, Q8LC16, Q9SYG8
      Conserved Domains (1) summary
      cl22856
      Location:5 → 236
      SNARE; SNARE motif

    2. NM_001333630.1 → NP_001320883.1  Membrane fusion protein Use1 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AP59, A0A5S9WLQ0, Q8LC16

    3. NM_001333631.1 → NP_001320884.1  Membrane fusion protein Use1 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AP56, A0A5S9WLQ0, Q8LC16
      Conserved Domains (1) summary
      cl22856
      Location:11 → 242
      SNARE; SNARE motif
    Nucleotide Protein
    Heading Accession and Version

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