U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    LCAT3 lecithin:cholesterol acyltransferase 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821286, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    LCAT3
    Official Full Name
    lecithin:cholesterol acyltransferase 3
    Primary source
    TAIR:AT3G03310
    Locus tag
    AT3G03310
    See related
    Araport:AT3G03310
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS LECITHIN:CHOLESTEROL ACYLTRANSFERASE 3; ATLCAT3; lecithin:cholesterol acyltransferase 3; T21P5.27; T21P5_27
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LCAT3 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    11
    Sequence:
    Chromosome: 3; NC_003074.8 (778568..781703, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Adenine nucleotide alpha hydrolases-like superfamily protein Neighboring gene dicer-like 2 Neighboring gene Calcineurin-like metallo-phosphoesterase superfamily protein Neighboring gene RNA-binding ASCH domain protein Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein Neighboring gene LUC7 related protein Neighboring gene cold-regulated protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Cloning and functional characterization of a phospholipid:diacylglycerol acyltransferase from Arabidopsis. Ståhl U, et al. Plant Physiol, 2004 Jul. PMID 15247387, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

    Go to the top of the page

    General gene information

    Go to the top of the page Help

    Homology

    NM_111202.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables O-acyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables phosphatidylserine 1-acylhydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables phospholipase A1 activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    lecithin:cholesterol acyltransferase 3
    NP_566201.1
    • lecithin:cholesterol acyltransferase 3 (LCAT3); FUNCTIONS IN: phosphatidylcholine-sterol O-acyltransferase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lecithin:cholesterol acyltransferase (InterPro:IPR003386); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G19860.1); Has 560 Blast hits to 555 proteins in 155 species: Archae - 2; Bacteria - 82; Metazoa - 189; Fungi - 22; Plants - 147; Viruses - 0; Other Eukaryotes - 118 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      778568..781703 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111202.4 → NP_566201.1  lecithin:cholesterol acyltransferase 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566201.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q93V61, Q9SRN5
      UniProtKB/TrEMBL
      A0A178V4V2, A0A5S9X8T6
      Conserved Domains (1) summary
      PLN02733
      Location:1 → 447
      PLN02733; phosphatidylcholine-sterol O-acyltransferase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q93V61.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools