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    weak chloroplast movement under blue light protein (DUF827) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821180, updated on 18-Sep-2024

    Summary

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    Official Full Name
    weak chloroplast movement under blue light protein (DUF827)
    Primary source
    TAIR:AT3G02930
    Locus tag
    AT3G02930
    See related
    Araport:AT3G02930
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F13E7.12; F13E7_12
    Summary
    Encodes a microtubule-associated protein.
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    4
    Sequence:
    Chromosome: 3; NC_003074.8 (654779..658637)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene AIG2-like (avirulence induced gene) family protein Neighboring gene ncRNA Neighboring gene Replication protein A, subunit RPA32 Neighboring gene myb domain protein 107 Neighboring gene Tho complex subunit 7/Mft1p

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Purification and characterization of novel microtubule-associated proteins from Arabidopsis cell suspension cultures. Hamada T, et al. Plant Physiol, 2013 Dec. PMID 24134884, Free PMC Article
    2. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001202868.1
    NM_001337447.1
    NM_001337448.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in endoplasmic reticulum HDA PubMed 
    part_of microtubule associated complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    weak chloroplast movement under blue light protein (DUF827)
    NP_001189797.1
    • Plant protein of unknown function (DUF827); LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT5G16730.1).
    NP_001319456.1
    • Plant protein of unknown function (DUF827); LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT5G16730.1); Has 245110 Blast hits to 119184 proteins in 3857 species: Archae - 3264; Bacteria - 55991; Metazoa - 95493; Fungi - 19215; Plants - 14009; Viruses - 1145; Other Eukaryotes - 55993 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      654779..658637
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001337447.1 → NP_001319456.1  weak chloroplast movement under blue light protein (DUF827) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9M8T5
      UniProtKB/TrEMBL
      A0A178V977, A0A654F8S8, A0A7G2ELL8
      Conserved Domains (1) summary
      PTZ00121
      Location:93 → 764
      PTZ00121; MAEBL; Provisional

    2. NM_001337448.1 → NP_001327934.1  weak chloroplast movement under blue light protein (DUF827) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9M8T5
      UniProtKB/TrEMBL
      A0A178V977, A0A654F8S8, A0A7G2ELL8
      Conserved Domains (1) summary
      PTZ00121
      Location:93 → 764
      PTZ00121; MAEBL; Provisional

    3. NM_001202868.1 → NP_001189797.1  weak chloroplast movement under blue light protein (DUF827) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001189797.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V977, A0A7G2ELL8, F4IZP3
      Conserved Domains (1) summary
      PTZ00121
      Location:91 → 762
      PTZ00121; MAEBL; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9M8T5.1

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