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    RIK RS2-interacting KH protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822600, updated on 18-Sep-2024

    Summary

    Official Symbol
    RIK
    Official Full Name
    RS2-interacting KH protein
    Primary source
    TAIR:AT3G29390
    Locus tag
    AT3G29390
    See related
    Araport:AT3G29390
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    RS2-interacting KH protein
    Summary
    Nuclear localized K-homology containing protein that interacts with AS1.
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    Genomic context

    See RIK in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    11
    Sequence:
    Chromosome: 3; NC_003074.8 (11289495..11294774)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Cyclin-like family protein Neighboring gene dentin sialophosphoprotein-like protein Neighboring gene exocyst subunit exo70 family protein E1 Neighboring gene Terpenoid cyclases/Protein prenyltransferases superfamily protein

    General gene information

    NM_113865.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables RNA binding  
    enables RNA binding PubMed 
    Component Evidence Code Pubs
    located_in nucleus  
    located_in nucleus  
    located_in nucleus PubMed 

    General protein information

    Preferred Names
    RS2-interacting KH protein
    NP_566850.3
    • RS2-interacting KH protein (RIK); FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; Has 9708 Blast hits to 6008 proteins in 528 species: Archae - 14; Bacteria - 833; Metazoa - 2799; Fungi - 1318; Plants - 2564; Viruses - 582; Other Eukaryotes - 1598 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      11289495..11294774
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001339023.1 → NP_001326115.1  RS2-interacting KH protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VKN8, A0A1I9LNA6
    2. NM_113865.4 → NP_566850.3  RS2-interacting KH protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566850.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q32SG0, Q8VZ97, Q9LIA4
      UniProtKB/TrEMBL
      A0A654FGX3
      Conserved Domains (1) summary
      cl00098
      Location:205 → 263
      KH-I; K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that ...
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