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    SAMC2 S-adenosylmethionine carrier 2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 840304, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SAMC2
    Official Full Name
    S-adenosylmethionine carrier 2
    Primary source
    TAIR:AT1G34065
    Locus tag
    AT1G34065
    See related
    Araport:AT1G34065
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    S-adenosylmethionine carrier 2
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    Genomic context

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    See SAMC2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    12
    Sequence:
    Chromosome: 1; NC_003070.9 (12398428..12401036, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Ankyrin repeat family protein Neighboring gene Pyridoxal phosphate (PLP)-dependent transferases superfamily protein Neighboring gene Copia-like polyprotein/retrotransposon Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Molecular identification of an Arabidopsis S-adenosylmethionine transporter. Analysis of organ distribution, bacterial expression, reconstitution into liposomes, and functional characterization. Palmieri L, et al. Plant Physiol, 2006 Nov. PMID 16950860, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. SAMC1 and SAMC2 are two isoforms of a SAM transporter in Arabidopsis. SAMC1 is expressed at a significantly higher level than SAMC2, although both genes are transcriptionally active. [SAMC2]
      Title: Molecular identification of an Arabidopsis S-adenosylmethionine transporter. Analysis of organ distribution, bacterial expression, reconstitution into liposomes, and functional characterization.
    Submit: New GeneRIF Correction

    General gene information

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    NM_001333084.1
    NM_103129.5

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    S-adenosylmethionine carrier 2
    NP_564436.4
    • S-adenosylmethionine carrier 2 (SAMC2); FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine carrier 1 (TAIR:AT4G39460.2); Has 26837 Blast hits to 14208 proteins in 451 species: Archae - 0; Bacteria - 2; Metazoa - 11303; Fungi - 7745; Plants - 4960; Viruses - 0; Other Eukaryotes - 2827 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      12398428..12401036 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103129.5 → NP_564436.4  S-adenosylmethionine carrier 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564436.4

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4HT41, Q500W9, Q9FX15
      UniProtKB/TrEMBL
      A0A178WHA4
      Conserved Domains (2) summary
      PTZ00168
      Location:79 → 328
      PTZ00168; mitochondrial carrier protein; Provisional
      pfam00153
      Location:247 → 339
      Mito_carr; Mitochondrial carrier protein

    2. NM_001333084.1 → NP_001322412.1  S-adenosylmethionine carrier 2 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WHA4, A0A1P8ATX1
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4HT41.1

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