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    ATPD F-type H+-transporting ATPase subunit delta [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 826551, updated on 18-Sep-2024

    Summary

    Official Symbol
    ATPD
    Official Full Name
    F-type H+-transporting ATPase subunit delta
    Primary source
    TAIR:AT4G09650
    Locus tag
    AT4G09650
    See related
    Araport:AT4G09650
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATP synthase delta-subunit gene; PDE332; PIGMENT DEFECTIVE 332; T25P22.90; T25P22_90
    Summary
    Encodes the chloroplast ATPase delta-subunit.
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    Genomic context

    See ATPD in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    1
    Sequence:
    Chromosome: 4; NC_003075.7 (6100714..6101864)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene S locus-related glycoprotein 1 (SLR1) binding pollen coat protein family Neighboring gene uncharacterized protein Neighboring gene zinc finger MYM-type-like protein Neighboring gene Oxidoreductase family protein

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_117033.3

    General protein information

    Preferred Names
    F-type H+-transporting ATPase subunit delta
    NP_192703.1
    • ATP synthase delta-subunit gene (ATPD); FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism; INVOLVED IN: response to cold, defense response to bacterium, photosynthetic electron transport in photosystem I, photosynthetic electron transport in photosystem II, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, OSCP/delta subunit, conserved site (InterPro:IPR020781), ATPase, F1 complex, OSCP/delta subunit (InterPro:IPR000711); Has 4372 Blast hits to 4372 proteins in 1436 species: Archae - 0; Bacteria - 2635; Metazoa - 155; Fungi - 114; Plants - 153; Viruses - 0; Other Eukaryotes - 1315 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      6100714..6101864
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_117033.3NP_192703.1  F-type H+-transporting ATPase subunit delta [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_192703.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8RY87, Q9SSS9
      UniProtKB/TrEMBL
      A0A178V1L3, A0A5S9XRG6
      Conserved Domains (1) summary
      pfam00213
      Location:52225
      OSCP; ATP synthase delta (OSCP) subunit