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    CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824461, updated on 18-Sep-2024

    Summary

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    Official Full Name
    CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein
    Primary source
    TAIR:AT3G52950
    Locus tag
    AT3G52950
    See related
    Araport:AT3G52950
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (19634331..19636845)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Ergosterol biosynthesis ERG4/ERG24 family Neighboring gene Putative membrane lipoprotein Neighboring gene tRNA-Leu Neighboring gene miscRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001203145.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein
    NP_001190074.1
    • CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein (TAIR:AT2G36500.1).
    NP_190863.3
    • CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein (TAIR:AT2G36500.1); Has 6963 Blast hits to 5172 proteins in 1360 species: Archae - 807; Bacteria - 5016; Metazoa - 6; Fungi - 130; Plants - 259; Viruses - 0; Other Eukaryotes - 745 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      19634331..19636845
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_115155.5 → NP_190863.3  CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190863.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L7L7, Q9LF97
      UniProtKB/TrEMBL
      A0A178VLH8, A0A5S9XKB6
      Conserved Domains (3) summary
      cd06409
      Location:417 → 502
      PB1_MUG70; The MUG70 protein is a product of the meiotically up-regulated gene 70 which has a role in meiosis and harbors a PB1 domain. The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell ...
      cd17781
      Location:69 → 185
      CBS_pair_MUG70_1; Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains similar to MUG70 repeat1
      cd17782
      Location:238 → 354
      CBS_pair_MUG70_2; Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains similar to MUG70 repeat2

    2. NM_001203145.1 → NP_001190074.1  CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190074.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L7L7, Q9LF97
      UniProtKB/TrEMBL
      A0A178VLH8, A0A5S9XKB6
      Conserved Domains (3) summary
      cd06409
      Location:417 → 502
      PB1_MUG70; The MUG70 protein is a product of the meiotically up-regulated gene 70 which has a role in meiosis and harbors a PB1 domain. The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell ...
      cd17781
      Location:69 → 185
      CBS_pair_MUG70_1; Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains similar to MUG70 repeat1
      cd17782
      Location:238 → 354
      CBS_pair_MUG70_2; Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains similar to MUG70 repeat2
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LF97.1

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