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    FLA8 FASCICLIN-like arabinogalactan protein 8 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819155, updated on 18-Sep-2024

    Summary

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    Official Symbol
    FLA8
    Official Full Name
    FASCICLIN-like arabinogalactan protein 8
    Primary source
    TAIR:AT2G45470
    Locus tag
    AT2G45470
    See related
    Araport:AT2G45470
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AGP8; ARABINOGALACTAN PROTEIN 8; F4L23.2; FASCICLIN-like arabinogalactan protein 8
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    Genomic context

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    See FLA8 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_003071.7 (18742477..18744322, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene binding protein Neighboring gene SMAD/FHA domain-containing protein Neighboring gene growth-regulating factor 9 Neighboring gene ataurora3 Neighboring gene AAA-type ATPase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Hydroponic isotope labelling of entire plants (HILEP) for quantitative plant proteomics; an oxidative stress case study. Bindschedler LV, et al. Phytochemistry, 2008 Jul. PMID 18538804
    2. Identification of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A proteomic and genomic analysis. Borner GH, et al. Plant Physiol, 2003 Jun. PMID 12805588, Free PMC Article
    3. Prediction of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A genomic analysis. Borner GH, et al. Plant Physiol, 2002 Jun. PMID 12068095, Free PMC Article
    4. Mapping the Arabidopsis organelle proteome. Dunkley TP, et al. Proc Natl Acad Sci U S A, 2006 Apr 25. PMID 16618929, Free PMC Article
    5. 14-3-3 proteins fine-tune plant nutrient metabolism. Shin R, et al. FEBS Lett, 2011 Jan 3. PMID 21094157

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_130109.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in apoplast HDA PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytosol HDA PubMed 
    located_in membrane TAS
    Traceable Author Statement
    more info
    		 PubMed 
    located_in plasma membrane HDA PubMed 
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in secretory vesicle HDA PubMed 

    General protein information

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    Preferred Names
    FASCICLIN-like arabinogalactan protein 8
    NP_566043.1
    • FASCICLIN-like arabinogalactan protein 8 (FLA8); LOCATED IN: anchored to plasma membrane, apoplast, plasma membrane, anchored to membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan-protein 10 (TAIR:AT3G60900.1); Has 14155 Blast hits to 6880 proteins in 856 species: Archae - 79; Bacteria - 4506; Metazoa - 1333; Fungi - 788; Plants - 1999; Viruses - 868; Other Eukaryotes - 4582 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      18742477..18744322 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_130109.3 → NP_566043.1  FASCICLIN-like arabinogalactan protein 8 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566043.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O22126, Q56ZW9, Q8L9B1, Q9FR46
      UniProtKB/TrEMBL
      A0A178VL71, A0A5S9X774
      Conserved Domains (2) summary
      COG2335
      Location:167 → 334
      FAS1; Uncaracterized surface protein containing fasciclin (FAS1) repeats [General function prediction only]
      pfam02469
      Location:197 → 328
      Fasciclin; Fasciclin domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O22126.1

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