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    myosin heavy chain, cardiac protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832735, updated on 18-Sep-2024

    Summary

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    Official Full Name
    myosin heavy chain, cardiac protein
    Primary source
    TAIR:AT5G26770
    Locus tag
    AT5G26770
    See related
    Araport:AT5G26770
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F2P16.30; F2P16_30
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    5
    Sequence:
    Chromosome: 5; NC_003076.8 (9407647..9410138, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene shaggy-related kinase 11 Neighboring gene RNA polymerase II subunit B1 CTD phosphatase RPAP2-like protein Neighboring gene pseudo Neighboring gene serine hydroxymethyltransferase 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A novel family of plant nuclear envelope-associated proteins. Pawar V, et al. J Exp Bot, 2016 Oct. PMID 27630107
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001036869.2
    NM_001343979.1
    NM_001343980.1
    NM_001343981.1
    NM_122559.2
    NM_203111.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nuclear envelope IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    myosin heavy chain, cardiac protein
    NP_001031946.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05830.1); Has 26484 Blast hits to 16065 proteins in 1382 species: Archae - 343; Bacteria - 2653; Metazoa - 15273; Fungi - 2108; Plants - 1148; Viruses - 36; Other Eukaryotes - 4923 (source: NCBI BLink).
    NP_568487.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_974840.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      9407647..9410138 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_122559.2 → NP_568487.1  myosin heavy chain, cardiac protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568487.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4K1B4, Q5PP55
      UniProtKB/TrEMBL
      A0A178UGF8, A0A654G4B9
      Conserved Domains (1) summary
      COG1196
      Location:13 → 297
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    2. NM_203111.2 → NP_974840.1  myosin heavy chain, cardiac protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974840.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4K1B4, Q5PP55
      UniProtKB/TrEMBL
      A0A178UGF8, A0A654G4B9
      Conserved Domains (1) summary
      COG1196
      Location:13 → 297
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    3. NM_001343979.1 → NP_001330545.1  myosin heavy chain, cardiac protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UGF8, A0A1P8BB47

    4. NM_001343980.1 → NP_001330547.1  myosin heavy chain, cardiac protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UGF8, A0A1P8BB41

    5. NM_001343981.1 → NP_001330546.1  myosin heavy chain, cardiac protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UGF8, A0A1P8BB41

    6. NM_001036869.2 → NP_001031946.1  myosin heavy chain, cardiac protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031946.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UGF8
      Conserved Domains (1) summary
      TIGR02168
      Location:13 → 249
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4K1B4.1

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