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    hypothetical protein (DUF688) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824339, updated on 18-Sep-2024

    Summary

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    Official Full Name
    hypothetical protein (DUF688)
    Primary source
    TAIR:AT3G51760
    Locus tag
    AT3G51760
    See related
    Araport:AT3G51760
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    4
    Sequence:
    Chromosome: 3; NC_003074.8 (19197337..19199516, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene inflorescence meristem receptor-like kinase 2 Neighboring gene miscRNA Neighboring gene uncharacterized protein Neighboring gene tetratricopeptide repeat (TPR)-containing protein Neighboring gene BCL-2-associated athanogene 4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001203130.1
    NM_115035.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    hypothetical protein (DUF688)
    NP_001118821.1
    • Protein of unknown function (DUF688); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_001190059.1
    • Protein of unknown function (DUF688); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789).
    NP_001319726.1
    • Protein of unknown function (DUF688); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789).
    NP_190744.2
    • Protein of unknown function (DUF688); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); Has 38 Blast hits to 38 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      19197337..19199516 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001125349.1 → NP_001118821.1  hypothetical protein (DUF688) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001118821.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VKH0, F4J4I7, Q5Q0C5
      Conserved Domains (1) summary
      pfam05097
      Location:17 → 183
      DUF688; Protein of unknown function (DUF688)

    2. NM_001339532.1 → NP_001319726.1  hypothetical protein (DUF688) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VKH0, F4J4I7, Q5Q0C5

    3. NM_001203130.1 → NP_001190059.1  hypothetical protein (DUF688) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190059.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XK56, A0A7G2ET95, F4J4I8
      Conserved Domains (1) summary
      pfam05097
      Location:8 → 174
      DUF688; Protein of unknown function (DUF688)

    4. NM_115035.2 → NP_190744.2  hypothetical protein (DUF688) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190744.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VKH0, F4J4I7, Q5Q0C5
      Conserved Domains (1) summary
      pfam05097
      Location:17 → 183
      DUF688; Protein of unknown function (DUF688)
    Nucleotide Protein
    Heading Accession and Version

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