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    Peptidyl-tRNA hydrolase II (PTH2) family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830935, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Peptidyl-tRNA hydrolase II (PTH2) family protein
    Primary source
    TAIR:AT5G10700
    Locus tag
    AT5G10700
    See related
    Araport:AT5G10700
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MAJ23.60; MAJ23_60
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    3
    Sequence:
    Chromosome: 5; NC_003076.8 (3378053..3378901, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene calmodulin-binding protein-like protein Neighboring gene pseudo Neighboring gene calmodulin-binding protein-like protein Neighboring gene pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein Neighboring gene methionyl-tRNA synthetase Neighboring gene ncRNA Neighboring gene centromere protein O Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001343132.1
    NM_121108.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables aminoacyl-tRNA hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    Peptidyl-tRNA hydrolase II (PTH2) family protein
    NP_196631.1
    • Peptidyl-tRNA hydrolase II (PTH2) family protein; FUNCTIONS IN: aminoacyl-tRNA hydrolase activity, protein tyrosine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation, translation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-tRNA hydrolase, PTH2 (InterPro:IPR002833), Protein-tyrosine phosphatase, low molecular weight (InterPro:IPR017867); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      3378053..3378901 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121108.1 → NP_196631.1  Peptidyl-tRNA hydrolase II (PTH2) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196631.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9FT62
      Conserved Domains (1) summary
      cd02429
      Location:71 → 184
      PTH2_like; Peptidyl-tRNA hydrolase, type 2 (PTH2)_like . Peptidyl-tRNA hydrolase activity releases tRNA from the premature translation termination product peptidyl-tRNA. Two structurally different enzymes have been reported to encode such activity, Pth present in ...

    2. NM_001343132.1 → NP_001331209.1  Peptidyl-tRNA hydrolase II (PTH2) family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BD66, A0A654FZZ7
      Conserved Domains (1) summary
      cd02429
      Location:71 → 184
      PTH2_like; Peptidyl-tRNA hydrolase, type 2 (PTH2)_like . Peptidyl-tRNA hydrolase activity releases tRNA from the premature translation termination product peptidyl-tRNA. Two structurally different enzymes have been reported to encode such activity, Pth present in ...
    Nucleotide Protein
    Heading Accession and Version

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