U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    LOC105370475 uncharacterized LOC105370475 [ Homo sapiens (human) ]

    Gene ID: 105370475, updated on 10-Dec-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC105370475
    Gene description
    uncharacterized LOC105370475
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC105370475 in Genome Data Viewer
    Location:
    14q21.2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (45366149..45389286)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (39558172..39581309)

    Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene MPRA-validated peak2147 silencer Neighboring gene RNA, U6 small nuclear 552, pseudogene Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr14:45763672-45764262 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr14:45764263-45764851 Neighboring gene DnaJ heat shock protein family (Hsp40) member C19 pseudogene 9 Neighboring gene uncharacterized LOC105370476 Neighboring gene NANOG hESC enhancer GRCh37_chr14:45964153-45964656 Neighboring gene uncharacterized LOC124903308 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr14:46021039-46021821 Neighboring gene uncharacterized LOC107984644

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    Phenotypes

    Go to the top of the page Help

    Review eQTL and phenotype association data in this region using PheGenI

    Variation

    Go to the top of the page Help

    See studies and variants in dbVar

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

      Range
      45366149..45389286
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_943817.4 RNA Sequence

    2. XR_943818.4 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060938.1 Alternate T2T-CHM13v2.0

      Range
      39558172..39581309
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007084663.1 RNA Sequence

    2. XR_007084664.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials