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    CG12702 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 32993, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG12702provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0031070
    Locus tag
    Dmel_CG12702
    See related
    AllianceGenome:FB:FBgn0031070
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG12702; lincRNA.1023
    Summary
    Is expressed in several structures, including CNS glial cell; central brain primordium; embryonic central brain; and ventral nerve cord primordium. Orthologous to human CIP2A (cellular inhibitor of PP2A). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG12702 in Genome Data Viewer
    Location:
    18F1-18F1; 1-64 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (19759173..19764874, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (19653206..19658907, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR45501 Neighboring gene parvin Neighboring gene Augmenter of liver regeneration Neighboring gene ATP binding cassette subfamily D member 3 Neighboring gene zelda Neighboring gene long non-coding RNA:CR44885

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evidence for involvement of the alcohol consumption WDPCP gene in lipid metabolism, and liver cirrhosis. O'Farrell F, et al. Sci Rep, 2023 Nov 23. PMID 37996473, Free PMC Article
    2. Hedgehog targets in the Drosophila embryo and the mechanisms that generate tissue-specific outputs of Hedgehog signaling. Biehs B, et al. Development, 2010 Nov. PMID 20978080, Free PMC Article
    3. Quantifying adaptive evolution in the Drosophila immune system. Obbard DJ, et al. PLoS Genet, 2009 Oct. PMID 19851448, Free PMC Article
    4. Toward a comprehensive map of the effectors of rab GTPases. Gillingham AK, et al. Dev Cell, 2014 Nov 10. PMID 25453831, Free PMC Article
    5. Analysis of Ras-induced overproliferation in Drosophila hemocytes. Asha H, et al. Genetics, 2003 Jan. PMID 12586708, Free PMC Article

    See all (27) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG12702-PA
    CG12702-PB
    CG12702-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      19759173..19764874 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001298536.1 → NP_001285465.1  uncharacterized protein Dmel_CG12702, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285465.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q4QQC1, Q9VWC7
      Conserved Domains (4) summary
      pfam12329
      Location:738 → 793
      TMF_DNA_bd; TATA element modulatory factor 1 DNA binding
      pfam13300
      Location:834 → 870
      DUF4078; Domain of unknown function (DUF4078)
      pfam15898
      Location:787 → 855
      PRKG1_interact; cGMP-dependent protein kinase interacting domain
      pfam17078
      Location:633 → 827
      SHE3; SWI5-dependent HO expression protein 3

    2. NM_001272806.1 → NP_001259735.1  uncharacterized protein Dmel_CG12702, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001259735.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q4QQC1, Q9VWC7
      Conserved Domains (4) summary
      pfam12329
      Location:738 → 793
      TMF_DNA_bd; TATA element modulatory factor 1 DNA binding
      pfam13300
      Location:834 → 870
      DUF4078; Domain of unknown function (DUF4078)
      pfam15898
      Location:787 → 855
      PRKG1_interact; cGMP-dependent protein kinase interacting domain
      pfam17078
      Location:633 → 827
      SHE3; SWI5-dependent HO expression protein 3

    3. NM_134511.2 → NP_608355.1  uncharacterized protein Dmel_CG12702, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_608355.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q4QQC1, Q9VWC7
      Related
      FBpp0074578
      Conserved Domains (4) summary
      pfam12329
      Location:738 → 793
      TMF_DNA_bd; TATA element modulatory factor 1 DNA binding
      pfam13300
      Location:834 → 870
      DUF4078; Domain of unknown function (DUF4078)
      pfam15898
      Location:787 → 855
      PRKG1_interact; cGMP-dependent protein kinase interacting domain
      pfam17078
      Location:633 → 827
      SHE3; SWI5-dependent HO expression protein 3
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VWC7 Q9VWC7

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