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    STIM1 stromal interaction molecule 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 717963, updated on 17-Aug-2024

    Summary

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    Official Symbol
    STIM1provided by VGNC
    Official Full Name
    stromal interaction molecule 1provided by VGNC
    Primary source
    VGNC:VGNC:77911
    Locus tag
    EGK_06626
    See related
    Ensembl:ENSMMUG00000003958
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See STIM1 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (64382434..64600222, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (63346165..63564179, complement)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor 52B2-like Neighboring gene ribonucleotide reductase catalytic subunit M1 Neighboring gene non-histone chromosomal protein HMG-14 pseudogene Neighboring gene peptidyl-prolyl cis-trans isomerase A pseudogene Neighboring gene ras homolog family member G Neighboring gene post-GPI attachment to proteins 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium channel regulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in activation of store-operated calcium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular calcium ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in store-operated calcium entry IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    stromal interaction molecule 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261535.1 → NP_001248464.1  stromal interaction molecule 1 precursor

      See identical proteins and their annotated locations for NP_001248464.1

      Status: PROVISIONAL

      Source sequence(s)
      JV048054
      UniProtKB/TrEMBL
      A0A8J8XFF9, F6ZFD0, G7NE71, I0FUJ9
      Related
      ENSMMUP00000005288.4, ENSMMUT00000005615.4
      Conserved Domains (3) summary
      cd09573
      Location:128 → 201
      SAM_STIM1; SAM domain of STIM1 subfamily proteins
      pfam16533
      Location:344 → 441
      SOAR; STIM1 Orai1-activating region
      cl25732
      Location:237 → 434
      SMC_N; RecF/RecN/SMC N terminal domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      64382434..64600222 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015115040.2 → XP_014970526.1  stromal interaction molecule 1 isoform X3

      Conserved Domains (3) summary
      cd09573
      Location:128 → 201
      SAM_STIM1; SAM domain of STIM1 subfamily proteins
      COG1196
      Location:237 → 434
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam16533
      Location:344 → 441
      SOAR; STIM1 Orai1-activating region

    2. XM_015115038.2 → XP_014970524.2  stromal interaction molecule 1 isoform X1

      Conserved Domains (3) summary
      cd09573
      Location:128 → 201
      SAM_STIM1; SAM domain of STIM1 subfamily proteins
      COG1196
      Location:237 → 434
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam16533
      Location:344 → 441
      SOAR; STIM1 Orai1-activating region

    3. XM_015115039.2 → XP_014970525.1  stromal interaction molecule 1 isoform X2

      Conserved Domains (5) summary
      cd09573
      Location:128 → 201
      SAM_STIM1; SAM domain of STIM1 subfamily proteins
      smart00454
      Location:129 → 193
      SAM; Sterile alpha motif
      pfam06273
      Location:271 → 336
      eIF-4B; Plant specific eukaryotic initiation factor 4B
      pfam16533
      Location:344 → 441
      SOAR; STIM1 Orai1-activating region
      cl02440
      Location:422 → 498
      DAGK_acc; Diacylglycerol kinase accessory domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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