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    NELFE negative elongation factor complex member E [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 716913, updated on 17-Aug-2024

    Summary

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    Official Symbol
    NELFEprovided by VGNC
    Official Full Name
    negative elongation factor complex member Eprovided by VGNC
    Primary source
    VGNC:VGNC:83437
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    RDBP
    Orthologs
    human mouse all
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    Genomic context

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    See NELFE in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (137537207..137543933)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (32839434..32846136, complement)

    Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene complement C4-A Neighboring gene serine/threonine kinase 19 Neighboring gene decapping exoribonuclease Neighboring gene SKI2 subunit of superkiller complex Neighboring gene complement factor B Neighboring gene complement C2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of transcription elongation by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of NELF complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    negative elongation factor E
    Names
    RD RNA binding protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041757.1 Reference Mmul_10 Primary Assembly

      Range
      137537207..137543933
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001113911.4 → XP_001113911.2  negative elongation factor E isoform X1

      UniProtKB/TrEMBL
      A0A8J8Y9Z9, F6YEH9, F7DB05, F7DB12, G7MRL5, H9FZR4
      Conserved Domains (1) summary
      cd12305
      Location:260 → 334
      RRM_NELFE; RNA recognition motif in negative elongation factor E (NELF-E) and similar proteins

    2. XM_015136034.2 → XP_014991520.2  negative elongation factor E isoform X2

      UniProtKB/TrEMBL
      F6YEH9, F7DB05, F7DB12
      Conserved Domains (1) summary
      cd12305
      Location:255 → 329
      RRM_NELFE; RNA recognition motif in negative elongation factor E (NELF-E) and similar proteins

    3. XM_028847712.1 → XP_028703545.1  negative elongation factor E isoform X2

      UniProtKB/TrEMBL
      F6YEH9, F7DB05, F7DB12
      Conserved Domains (1) summary
      cd12305
      Location:255 → 329
      RRM_NELFE; RNA recognition motif in negative elongation factor E (NELF-E) and similar proteins

    4. XM_015136032.2 → XP_014991518.2  negative elongation factor E isoform X1

      UniProtKB/TrEMBL
      A0A8J8Y9Z9, F6YEH9, F7DB05, F7DB12, G7MRL5, H9FZR4
      Conserved Domains (1) summary
      cd12305
      Location:260 → 334
      RRM_NELFE; RNA recognition motif in negative elongation factor E (NELF-E) and similar proteins

    5. XM_015136033.2 → XP_014991519.2  negative elongation factor E isoform X1

      UniProtKB/TrEMBL
      A0A8J8Y9Z9, F6YEH9, F7DB05, F7DB12, G7MRL5, H9FZR4
      Conserved Domains (1) summary
      cd12305
      Location:260 → 334
      RRM_NELFE; RNA recognition motif in negative elongation factor E (NELF-E) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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