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    MATN1 matrilin 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 704521, updated on 17-Aug-2024

    Summary

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    Official Symbol
    MATN1provided by VGNC
    Official Full Name
    matrilin 1provided by VGNC
    Primary source
    VGNC:VGNC:106405
    See related
    Ensembl:ENSMMUG00000054963
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See MATN1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (193941589..193951903)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (29769469..29779784, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene syndecan 3 Neighboring gene uncharacterized LOC106997430 Neighboring gene lysosomal protein transmembrane 5 Neighboring gene basic proline-rich protein-like Neighboring gene basic proline-rich protein-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cartilage matrix protein
    Names
    matrilin 1, cartilage matrix protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      193941589..193951903
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001094970.4 → XP_001094970.1  cartilage matrix protein

      UniProtKB/TrEMBL
      A0A5F7ZI37, G7MI13
      Related
      ENSMMUP00000065267.1, ENSMMUT00000088344.1
      Conserved Domains (2) summary
      cd01475
      Location:37 → 260
      vWA_Matrilin; VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity. Some members of the matrilin family are expressed specifically in developing cartilage rudiments. ...
      cl00057
      Location:271 → 495
      vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    Nucleotide Protein
    Heading Accession and Version

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