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    GDPD4 glycerophosphodiester phosphodiesterase domain containing 4 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 698454, updated on 17-Aug-2024

    Summary

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    Official Symbol
    GDPD4provided by VGNC
    Official Full Name
    glycerophosphodiester phosphodiesterase domain containing 4provided by VGNC
    Primary source
    VGNC:VGNC:72777
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See GDPD4 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (70281831..70367221, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (69400551..69486131, complement)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene calpain 5 Neighboring gene myosin VIIA Neighboring gene mitochondrial import receptor subunit TOM20 homolog pseudogene Neighboring gene p21 (RAC1) activated kinase 1 Neighboring gene translation initiation factor IF-2-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables glycerophosphodiester phosphodiesterase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glycerophosphodiester phosphodiesterase domain-containing protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      70281831..70367221 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028833846.1 → XP_028689679.1  glycerophosphodiester phosphodiesterase domain-containing protein 4 isoform X2

      UniProtKB/TrEMBL
      G7NEE2
      Conserved Domains (1) summary
      cl14615
      Location:248 → 563
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

    2. XM_028833847.1 → XP_028689680.1  glycerophosphodiester phosphodiesterase domain-containing protein 4 isoform X4

      UniProtKB/TrEMBL
      G7NEE2
      Conserved Domains (1) summary
      cl14615
      Location:230 → 545
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

    3. XM_015115252.2 → XP_014970738.1  glycerophosphodiester phosphodiesterase domain-containing protein 4 isoform X3

      UniProtKB/TrEMBL
      G7NEE2
      Conserved Domains (2) summary
      COG0584
      Location:277 → 524
      UgpQ; Glycerophosphoryl diester phosphodiesterase [Lipid transport and metabolism]
      cl14615
      Location:256 → 559
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

    4. XM_015115250.2 → XP_014970736.1  glycerophosphodiester phosphodiesterase domain-containing protein 4 isoform X1

      UniProtKB/TrEMBL
      G7NEE2
      Conserved Domains (1) summary
      cl14615
      Location:256 → 571
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

    5. XM_028833845.1 → XP_028689678.1  glycerophosphodiester phosphodiesterase domain-containing protein 4 isoform X1

      UniProtKB/TrEMBL
      G7NEE2
      Conserved Domains (1) summary
      cl14615
      Location:256 → 571
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily
    Nucleotide Protein
    Heading Accession and Version

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