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    CNPPD1 cyclin Pas1/PHO80 domain containing 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 704271, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CNPPD1provided by VGNC
    Official Full Name
    cyclin Pas1/PHO80 domain containing 1provided by VGNC
    Primary source
    VGNC:VGNC:71347
    Locus tag
    EGK_04812
    See related
    Ensembl:ENSMMUG00000000791
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    C2orf24; C12H2orf24
    Orthologs
    human mouse all
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    Genomic context

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    See CNPPD1 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (106611039..106618146, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (101303887..101310110, complement)

    Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene non-homologous end joining factor 1 Neighboring gene solute carrier family 23 member 3 Neighboring gene uncharacterized LOC114671425 Neighboring gene reticulophagy regulator family member 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cyclin-dependent protein serine/threonine kinase regulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of cyclin-dependent protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cyclin-dependent protein kinase holoenzyme complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein CNPPD1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001194773.2 → NP_001181702.1  protein CNPPD1

      See identical proteins and their annotated locations for NP_001181702.1

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02000079
      UniProtKB/TrEMBL
      A0A1D5Q8J0, A0A8J8YN74, F6RA57, G7N8Y8
      Related
      ENSMMUP00000073454.1, ENSMMUT00000095831.1
      Conserved Domains (1) summary
      cl00050
      Location:85 → 174
      CYCLIN; Cyclin box fold. Protein binding domain functioning in cell-cycle and transcription control. Present in cyclins, TFIIB and Retinoblastoma (RB).The cyclins consist of 8 classes of cell cycle regulators that regulate cyclin dependent kinases (CDKs). TFIIB ...

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041765.1 Reference Mmul_10 Primary Assembly

      Range
      106611039..106618146 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028830499.1 → XP_028686332.1  protein CNPPD1 isoform X1

    2. XM_028830500.1 → XP_028686333.1  protein CNPPD1 isoform X2

    3. XM_015111028.2 → XP_014966514.1  protein CNPPD1 isoform X3

      UniProtKB/TrEMBL
      F6RA26
      Related
      ENSMMUP00000001075.4, ENSMMUT00000001146.4
      Conserved Domains (1) summary
      cl00050
      Location:94 → 183
      CYCLIN; Cyclin box fold. Protein binding domain functioning in cell-cycle and transcription control. Present in cyclins, TFIIB and Retinoblastoma (RB).The cyclins consist of 8 classes of cell cycle regulators that regulate cyclin dependent kinases (CDKs). TFIIB ...

    4. XM_001092614.4 → XP_001092614.2  protein CNPPD1 isoform X4

      See identical proteins and their annotated locations for XP_001092614.2

      UniProtKB/TrEMBL
      A0A1D5Q8J0, A0A8J8YN74, F6RA57, G7N8Y8
      Related
      ENSMMUP00000001072.4, ENSMMUT00000001143.4
      Conserved Domains (1) summary
      cl00050
      Location:85 → 174
      CYCLIN; Cyclin box fold. Protein binding domain functioning in cell-cycle and transcription control. Present in cyclins, TFIIB and Retinoblastoma (RB).The cyclins consist of 8 classes of cell cycle regulators that regulate cyclin dependent kinases (CDKs). TFIIB ...
    Nucleotide Protein
    Heading Accession and Version

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