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    TRMU tRNA mitochondrial 2-thiouridylase [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 714268, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TRMUprovided by VGNC
    Official Full Name
    tRNA mitochondrial 2-thiouridylaseprovided by VGNC
    Primary source
    VGNC:VGNC:79500
    See related
    Ensembl:ENSMMUG00000000807
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TRMU in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (5133234..5160780, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (88533015..88558299)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene cadherin EGF LAG seven-pass G-type receptor 1-like Neighboring gene protein FAM136A pseudogene Neighboring gene cadherin EGF LAG seven-pass G-type receptor 1 Neighboring gene 40S ribosomal protein S27-like Neighboring gene G2 and S-phase expressed 1 Neighboring gene tetratricopeptide repeat domain 38

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables sulfurtransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in tRNA wobble position uridine thiolation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mitochondrial tRNA-specific 2-thiouridylase 1
    Names
    tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
    XP_015006058.1
    XP_015006059.1
    XP_015006060.1
    XP_015006061.1
    XP_015006062.1
    XP_015006063.1
    XP_015006064.1
    XP_015006065.1
    XP_028683423.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      5133234..5160780 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015150573.2 → XP_015006059.1  mitochondrial tRNA-specific 2-thiouridylase 1 isoform X3

      UniProtKB/TrEMBL
      F6R1K4, G7N4C8
      Related
      ENSMMUP00000001098.4, ENSMMUT00000001170.4
      Conserved Domains (1) summary
      pfam03054
      Location:5 → 344
      tRNA_Me_trans; tRNA methyl transferase

    2. XM_015150572.2 → XP_015006058.1  mitochondrial tRNA-specific 2-thiouridylase 1 isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZJC9, G7N4C8
      Related
      ENSMMUP00000064742.1, ENSMMUT00000088602.1
      Conserved Domains (2) summary
      cd01998
      Location:6 → 383
      tRNA_Me_trans; tRNA methyl transferase. This family represents tRNA(5-methylaminomethyl-2-thiouridine)-methyltransferase which is involved in the biosynthesis of the modified nucleoside 5-methylaminomethyl-2-thiouridine present in the wobble position of some tRNAs. ...
      pfam03054
      Location:5 → 383
      tRNA_Me_trans; tRNA methyl transferase

    3. XM_015150579.2 → XP_015006065.1  mitochondrial tRNA-specific 2-thiouridylase 1 isoform X8

      Conserved Domains (1) summary
      cl00292
      Location:37 → 204
      AANH_like; Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases Universal Stress Response protein and electron transfer flavoprotein (ETF). The domain forms a apha/beta/apha fold which binds to Adenosine nucleotide.

    4. XM_015150576.2 → XP_015006062.1  mitochondrial tRNA-specific 2-thiouridylase 1 isoform X6

      Conserved Domains (1) summary
      cd01998
      Location:37 → 243
      tRNA_Me_trans; tRNA methyl transferase. This family represents tRNA(5-methylaminomethyl-2-thiouridine)-methyltransferase which is involved in the biosynthesis of the modified nucleoside 5-methylaminomethyl-2-thiouridine present in the wobble position of some tRNAs. ...

    5. XM_015150578.2 → XP_015006064.1  mitochondrial tRNA-specific 2-thiouridylase 1 isoform X7

      Conserved Domains (1) summary
      cl00292
      Location:45 → 212
      AANH_like; Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases Universal Stress Response protein and electron transfer flavoprotein (ETF). The domain forms a apha/beta/apha fold which binds to Adenosine nucleotide.

    6. XM_015150575.2 → XP_015006061.1  mitochondrial tRNA-specific 2-thiouridylase 1 isoform X5

      Conserved Domains (1) summary
      cd01998
      Location:45 → 251
      tRNA_Me_trans; tRNA methyl transferase. This family represents tRNA(5-methylaminomethyl-2-thiouridine)-methyltransferase which is involved in the biosynthesis of the modified nucleoside 5-methylaminomethyl-2-thiouridine present in the wobble position of some tRNAs. ...

    7. XM_028827590.1 → XP_028683423.1  mitochondrial tRNA-specific 2-thiouridylase 1 isoform X2

      UniProtKB/TrEMBL
      G7N4C8
      Conserved Domains (1) summary
      pfam03054
      Location:3 → 357
      tRNA_Me_trans; tRNA methyl transferase

    8. XM_015150574.2 → XP_015006060.1  mitochondrial tRNA-specific 2-thiouridylase 1 isoform X4

      Conserved Domains (1) summary
      cd01998
      Location:30 → 294
      tRNA_Me_trans; tRNA methyl transferase. This family represents tRNA(5-methylaminomethyl-2-thiouridine)-methyltransferase which is involved in the biosynthesis of the modified nucleoside 5-methylaminomethyl-2-thiouridine present in the wobble position of some tRNAs. ...

    9. XM_015150577.2 → XP_015006063.1  mitochondrial tRNA-specific 2-thiouridylase 1 isoform X6

      Conserved Domains (1) summary
      cd01998
      Location:37 → 243
      tRNA_Me_trans; tRNA methyl transferase. This family represents tRNA(5-methylaminomethyl-2-thiouridine)-methyltransferase which is involved in the biosynthesis of the modified nucleoside 5-methylaminomethyl-2-thiouridine present in the wobble position of some tRNAs. ...

    RNA

    1. XR_003719825.1 RNA Sequence

    2. XR_001447824.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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