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    KATNAL1 katanin catalytic subunit A1 like 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 712636, updated on 17-Aug-2024

    Summary

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    Official Symbol
    KATNAL1provided by VGNC
    Official Full Name
    katanin catalytic subunit A1 like 1provided by VGNC
    Primary source
    VGNC:VGNC:73917
    See related
    Ensembl:ENSMMUG00000004922
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See KATNAL1 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 17 NC_041770.1 (9280398..9375424, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 17 NC_027909.1 (9789474..9883583, complement)

    Chromosome 17 - NC_041770.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106994205 Neighboring gene uncharacterized LOC114673545 Neighboring gene U6 spliceosomal RNA Neighboring gene peroxiredoxin-2 pseudogene Neighboring gene uncharacterized LOC114673466 Neighboring gene uncharacterized LOC106994207

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microtubule severing ATPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in microtubule severing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in microtubule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in microtubule cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    katanin p60 ATPase-containing subunit A-like 1
    NP_001181048.1
    XP_001099323.1
    XP_014976304.1
    XP_014976305.1
    XP_014976306.1
    XP_028692982.1
    XP_028692983.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001194119.3 → NP_001181048.1  katanin p60 ATPase-containing subunit A-like 1

      See identical proteins and their annotated locations for NP_001181048.1

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02000183
      UniProtKB/TrEMBL
      F6Y7A7, F7CDY0, H9G0J4
      Related
      ENSMMUP00000006531.3, ENSMMUT00000006945.4
      Conserved Domains (3) summary
      pfam09336
      Location:450 → 488
      Vps4_C; Vps4 C terminal oligomerization domain
      pfam17862
      Location:402 → 446
      AAA_lid_3; AAA+ lid domain
      cd19522
      Location:209 → 378
      RecA-like_KTNA1; Katanin p60 ATPase-containing subunit A1

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041770.1 Reference Mmul_10 Primary Assembly

      Range
      9280398..9375424 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015120819.2 → XP_014976305.1  katanin p60 ATPase-containing subunit A-like 1 isoform X1

      UniProtKB/TrEMBL
      F6Y7A7, F7CDY0, H9G0J4
      Related
      ENSMMUP00000036448.1, ENSMMUT00000043446.3
      Conserved Domains (3) summary
      pfam09336
      Location:450 → 488
      Vps4_C; Vps4 C terminal oligomerization domain
      pfam17862
      Location:402 → 446
      AAA_lid_3; AAA+ lid domain
      cd19522
      Location:209 → 378
      RecA-like_KTNA1; Katanin p60 ATPase-containing subunit A1

    2. XM_001099323.4 → XP_001099323.1  katanin p60 ATPase-containing subunit A-like 1 isoform X1

      See identical proteins and their annotated locations for XP_001099323.1

      UniProtKB/TrEMBL
      F6Y7A7, F7CDY0, H9G0J4
      Conserved Domains (3) summary
      pfam09336
      Location:450 → 488
      Vps4_C; Vps4 C terminal oligomerization domain
      pfam17862
      Location:402 → 446
      AAA_lid_3; AAA+ lid domain
      cd19522
      Location:209 → 378
      RecA-like_KTNA1; Katanin p60 ATPase-containing subunit A1

    3. XM_015120818.2 → XP_014976304.1  katanin p60 ATPase-containing subunit A-like 1 isoform X1

      UniProtKB/TrEMBL
      F6Y7A7, F7CDY0, H9G0J4
      Conserved Domains (3) summary
      pfam09336
      Location:450 → 488
      Vps4_C; Vps4 C terminal oligomerization domain
      pfam17862
      Location:402 → 446
      AAA_lid_3; AAA+ lid domain
      cd19522
      Location:209 → 378
      RecA-like_KTNA1; Katanin p60 ATPase-containing subunit A1

    4. XM_015120820.2 → XP_014976306.1  katanin p60 ATPase-containing subunit A-like 1 isoform X1

      UniProtKB/TrEMBL
      F6Y7A7, F7CDY0, H9G0J4
      Conserved Domains (3) summary
      pfam09336
      Location:450 → 488
      Vps4_C; Vps4 C terminal oligomerization domain
      pfam17862
      Location:402 → 446
      AAA_lid_3; AAA+ lid domain
      cd19522
      Location:209 → 378
      RecA-like_KTNA1; Katanin p60 ATPase-containing subunit A1

    5. XM_028837150.1 → XP_028692983.1  katanin p60 ATPase-containing subunit A-like 1 isoform X3

      Conserved Domains (1) summary
      COG0464
      Location:188 → 382
      SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]

    6. XM_028837149.1 → XP_028692982.1  katanin p60 ATPase-containing subunit A-like 1 isoform X2

      Conserved Domains (1) summary
      cd19522
      Location:209 → 378
      RecA-like_KTNA1; Katanin p60 ATPase-containing subunit A1
    Nucleotide Protein
    Heading Accession and Version

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