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    BEST1 bestrophin 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 718993, updated on 17-Aug-2024

    Summary

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    Official Symbol
    BEST1provided by VGNC
    Official Full Name
    bestrophin 1provided by VGNC
    Primary source
    VGNC:VGNC:70299
    See related
    Ensembl:ENSMMUG00000015147
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See BEST1 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (12160971..12181408, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (12276124..12296095, complement)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene inner centromere protein Neighboring gene uncharacterized LOC114672245 Neighboring gene ferritin heavy chain 1 Neighboring gene RAB3A interacting protein like 1 Neighboring gene fatty acid desaturase 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Bestrophin detected in the basal membrane of the retinal epithelium and drusen of monkeys with drusenoid maculopathy. Gouras P, et al. Graefes Arch Clin Exp Ophthalmol, 2009 Aug. PMID 19421767, Free PMC Article
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chloride channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    bestrophin-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      12160971..12181408 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001116583.4 → XP_001116583.2  bestrophin-1 isoform X1

      UniProtKB/TrEMBL
      F6S3Y4, G7NCV2
      Conserved Domains (1) summary
      pfam01062
      Location:9 → 316
      Bestrophin; RFP-TM, chloride channel

    2. XM_015113980.2 → XP_014969466.2  bestrophin-1 isoform X1

      UniProtKB/TrEMBL
      F6S3Y4, G7NCV2
      Related
      ENSMMUP00000037335.3, ENSMMUT00000044319.3
      Conserved Domains (1) summary
      pfam01062
      Location:9 → 316
      Bestrophin; RFP-TM, chloride channel

    3. XM_015113983.2 → XP_014969469.2  bestrophin-1 isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZG33, G7NCV2
      Related
      ENSMMUP00000064551.1, ENSMMUT00000081671.1
      Conserved Domains (1) summary
      pfam01062
      Location:9 → 290
      Bestrophin; RFP-TM, chloride channel

    RNA

    1. XR_001439391.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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