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    ARX aristaless related homeobox [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 699892, updated on 5-Mar-2024

    Summary

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    Gene symbol
    ARX
    Gene description
    aristaless related homeobox
    See related
    Ensembl:ENSMMUG00000055034
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ARX in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) X NC_041774.1 (24838987..24856683, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) X NC_027913.1 (24446202..24459093, complement)

    Chromosome X - NC_041774.1Genomic Context describing neighboring genes Neighboring gene phosphate cytidylyltransferase 1B, choline Neighboring gene uncharacterized LOC114674963 Neighboring gene DNA polymerase alpha 1, catalytic subunit Neighboring gene small Cajal body-specific RNA 24 Neighboring gene platelet-activating factor acetylhydrolase IB subunit beta pseudogene Neighboring gene 40S ribosomal protein S20 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    homeobox protein ARX

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041774.1 Reference Mmul_10 Primary Assembly

      Range
      24838987..24856683 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028841938.1 → XP_028697771.1  homeobox protein ARX

      UniProtKB/TrEMBL
      A0A5F8ABV8
      Conserved Domains (2) summary
      pfam03826
      Location:526 → 544
      OAR; OAR domain
      pfam00046
      Location:332 → 385
      Homeobox; Homeobox domain

    2. XM_028841937.1 → XP_028697770.1  homeobox protein ARX

      UniProtKB/TrEMBL
      A0A5F8ABV8
      Conserved Domains (2) summary
      pfam03826
      Location:526 → 544
      OAR; OAR domain
      pfam00046
      Location:332 → 385
      Homeobox; Homeobox domain

    3. XM_001091313.4 → XP_001091313.1  homeobox protein ARX

      UniProtKB/TrEMBL
      A0A5F8ABV8
      Related
      ENSMMUP00000075360.1, ENSMMUT00000109814.1
      Conserved Domains (2) summary
      pfam03826
      Location:526 → 544
      OAR; OAR domain
      pfam00046
      Location:332 → 385
      Homeobox; Homeobox domain
    Nucleotide Protein
    Heading Accession and Version

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