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    SLC16A4 solute carrier family 16 member 4 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 701535, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SLC16A4provided by VGNC
    Official Full Name
    solute carrier family 16 member 4provided by VGNC
    Primary source
    VGNC:VGNC:77398
    Locus tag
    EGK_01069
    See related
    Ensembl:ENSMMUG00000015022
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SLC16A4 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (113736734..113774297)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (111388383..111417513, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene prokineticin 1 Neighboring gene late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 Neighboring gene RNA binding motif protein 15 Neighboring gene uncharacterized LOC114671277 Neighboring gene potassium voltage-gated channel subfamily C member 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables monocarboxylic acid transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in monocarboxylic acid transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    monocarboxylate transporter 5
    Names
    solute carrier family 16, member 4 (monocarboxylic acid transporter 5)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001265727.1 → NP_001252656.1  monocarboxylate transporter 5

      See identical proteins and their annotated locations for NP_001252656.1

      Status: PROVISIONAL

      Source sequence(s)
      JV636444
      UniProtKB/TrEMBL
      A0A8J8Y4G2, F6V5B2, G7MIF8, I2CXU9
      Related
      ENSMMUP00000019690.3, ENSMMUT00000021060.4
      Conserved Domains (2) summary
      cd06174
      Location:24 → 476
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
      pfam07690
      Location:27 → 441
      MFS_1; Major Facilitator Superfamily

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      113736734..113774297
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028836339.1 → XP_028692172.1  monocarboxylate transporter 5 isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q1C3
      Related
      ENSMMUP00000041835.2, ENSMMUT00000056424.2
      Conserved Domains (1) summary
      cl28910
      Location:20 → 445
      MFS; Major Facilitator Superfamily

    2. XM_015146907.2 → XP_015002393.2  monocarboxylate transporter 5 isoform X2

      UniProtKB/TrEMBL
      F6V5B2
      Conserved Domains (1) summary
      cl28910
      Location:20 → 432
      MFS; Major Facilitator Superfamily

    3. XM_015146912.2 → XP_015002398.1  monocarboxylate transporter 5 isoform X3

      UniProtKB/TrEMBL
      F6V5B2
      Conserved Domains (1) summary
      cd06174
      Location:7 → 414
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    Nucleotide Protein
    Heading Accession and Version

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