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    ZSCAN20 zinc finger and SCAN domain containing 20 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 710291, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ZSCAN20provided by VGNC
    Official Full Name
    zinc finger and SCAN domain containing 20provided by VGNC
    Primary source
    VGNC:VGNC:78895
    Locus tag
    EGK_00530
    See related
    Ensembl:ENSMMUG00000006389
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ZSCAN20 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (191138523..191167368, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (32605909..32635417)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene CUB and Sushi multiple domains 2 Neighboring gene high mobility group box 4 Neighboring gene proteasome subunit alpha type-3-like Neighboring gene uncharacterized LOC114673124 Neighboring gene polyhomeotic homolog 2 Neighboring gene alpha 1,3-galactosyltransferase 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    zinc finger and SCAN domain-containing protein 20

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      191138523..191167368 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028836256.1 → XP_028692089.1  zinc finger and SCAN domain-containing protein 20 isoform X1

      UniProtKB/TrEMBL
      F7GWX2, G7MIA7
      Conserved Domains (5) summary
      COG5048
      Location:699 → 1033
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:740 → 760
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13837
      Location:483 → 568
      Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain
      cl02581
      Location:226 → 275
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
      cl02605
      Location:47 → 139
      SCAN; SCAN oligomerization domain

    2. XM_001107866.4 → XP_001107866.3  zinc finger and SCAN domain-containing protein 20 isoform X2

      UniProtKB/TrEMBL
      G7MIA7
      Conserved Domains (5) summary
      COG5048
      Location:698 → 1032
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:739 → 759
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13837
      Location:482 → 567
      Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain
      cl02581
      Location:226 → 275
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
      cl02605
      Location:47 → 139
      SCAN; SCAN oligomerization domain

    3. XM_028836264.1 → XP_028692097.1  zinc finger and SCAN domain-containing protein 20 isoform X3

      UniProtKB/TrEMBL
      F7GQB7, G7MIA7
      Related
      ENSMMUP00000040440.3, ENSMMUT00000047406.3
      Conserved Domains (4) summary
      COG5048
      Location:645 → 979
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:686 → 706
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13837
      Location:429 → 514
      Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain
      cl02605
      Location:47 → 139
      SCAN; SCAN oligomerization domain

    4. XM_015134753.2 → XP_014990239.2  zinc finger and SCAN domain-containing protein 20 isoform X1

      UniProtKB/TrEMBL
      F7GWX2, G7MIA7
      Related
      ENSMMUP00000008426.3, ENSMMUT00000008962.4
      Conserved Domains (5) summary
      COG5048
      Location:699 → 1033
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:740 → 760
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13837
      Location:483 → 568
      Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain
      cl02581
      Location:226 → 275
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
      cl02605
      Location:47 → 139
      SCAN; SCAN oligomerization domain
    Nucleotide Protein
    Heading Accession and Version

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