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    RIF1 replication timing regulatory factor 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 694817, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RIF1provided by VGNC
    Official Full Name
    replication timing regulatory factor 1provided by VGNC
    Primary source
    VGNC:VGNC:76806
    See related
    Ensembl:ENSMMUG00000008611
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See RIF1 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    37
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (38580651..38650553)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (37964714..38034961)

    Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene N-myc and STAT interactor Neighboring gene TNF alpha induced protein 6 Neighboring gene nebulin Neighboring gene ADP ribosylation factor like GTPase 5A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in telomere maintenance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    telomere-associated protein RIF1
    Names
    telomere-associated protein RIF1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041765.1 Reference Mmul_10 Primary Assembly

      Range
      38580651..38650553
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015110090.2 → XP_014965576.2  telomere-associated protein RIF1 isoform X1

      UniProtKB/TrEMBL
      F6U9Z7, H9FWK0
      Related
      ENSMMUP00000063353.1, ENSMMUT00000096964.1
      Conserved Domains (3) summary
      COG5271
      Location:1913 → 2129
      MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
      pfam12231
      Location:20 → 361
      Rif1_N; Rap1-interacting factor 1 N terminal
      cd14267
      Location:2306 → 2353
      Rif1_CTD_C-II_like; Saccharomyces cerevisiae Rap1-interacting factor 1 CTD domain, metazoan Rif1 C-II domains and related domains

    2. XM_015110092.2 → XP_014965578.2  telomere-associated protein RIF1 isoform X3

      UniProtKB/TrEMBL
      A0A5F8A333, H9FWK1
      Related
      ENSMMUP00000072337.1, ENSMMUT00000082933.1
      Conserved Domains (3) summary
      COG5271
      Location:1913 → 2129
      MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
      pfam12231
      Location:20 → 361
      Rif1_N; Rap1-interacting factor 1 N terminal
      cd14267
      Location:2280 → 2327
      Rif1_CTD_C-II_like; Saccharomyces cerevisiae Rap1-interacting factor 1 CTD domain, metazoan Rif1 C-II domains and related domains

    3. XM_015110091.2 → XP_014965577.2  telomere-associated protein RIF1 isoform X2

      UniProtKB/TrEMBL
      H9FWK0
      Related
      ENSMMUP00000075784.1, ENSMMUT00000088288.1
      Conserved Domains (3) summary
      COG5271
      Location:1905 → 2121
      MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
      pfam12231
      Location:20 → 361
      Rif1_N; Rap1-interacting factor 1 N terminal
      cd14267
      Location:2298 → 2345
      Rif1_CTD_C-II_like; Saccharomyces cerevisiae Rap1-interacting factor 1 CTD domain, metazoan Rif1 C-II domains and related domains

    RNA

    1. XR_001438575.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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