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    NFKBIB NFKB inhibitor beta [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 694844, updated on 17-Aug-2024

    Summary

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    Official Symbol
    NFKBIBprovided by VGNC
    Official Full Name
    NFKB inhibitor betaprovided by VGNC
    Primary source
    VGNC:VGNC:75341
    Locus tag
    EGK_10582
    See related
    Ensembl:ENSMMUG00000023643
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See NFKBIB in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (38151430..38163425)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (34639752..34652956)

    Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene heterogeneous nuclear ribonucleoprotein L Neighboring gene Ras and Rab interactor like Neighboring gene sirtuin 2 Neighboring gene coiled-coil glutamate rich protein 2 Neighboring gene seryl-tRNA synthetase 2, mitochondrial Neighboring gene mitochondrial ribosomal protein S12

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cellular response to lipopolysaccharide IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cytoplasmic sequestering of NF-kappaB IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    NF-kappa-B inhibitor beta

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001258157.1 → NP_001245086.1  NF-kappa-B inhibitor beta

      See identical proteins and their annotated locations for NP_001245086.1

      Status: PROVISIONAL

      Source sequence(s)
      JU470940
      UniProtKB/TrEMBL
      A0A8J8Y5R3, F7H1N6, G7NNJ5, H9FG70, H9YVM8
      Related
      ENSMMUP00000031129.4, ENSMMUT00000033265.4
      Conserved Domains (4) summary
      PHA03095
      Location:207 → 298
      PHA03095; ankyrin-like protein; Provisional
      COG0666
      Location:57 → 148
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:206 → 237
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:98 → 234
      Ank_2; Ankyrin repeats (3 copies)

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041772.1 Reference Mmul_10 Primary Assembly

      Range
      38151430..38163425
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015123803.2 → XP_014979289.1  NF-kappa-B inhibitor beta isoform X1

      UniProtKB/TrEMBL
      F7H1N6
      Conserved Domains (3) summary
      cd00204
      Location:2 → 175
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:12 → 148
      Ank_2; Ankyrin repeats (3 copies)
      sd00045
      Location:120 → 151
      ANK; ANK repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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