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    DCP1B decapping mRNA 1B [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 708089, updated on 17-Aug-2024

    Summary

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    Official Symbol
    DCP1Bprovided by VGNC
    Official Full Name
    decapping mRNA 1Bprovided by VGNC
    Primary source
    VGNC:VGNC:71699
    See related
    Ensembl:ENSMMUG00000010992
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See DCP1B in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (2022035..2089091, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (2046682..2106410, complement)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene calcium voltage-gated channel auxiliary subunit alpha2delta 4 Neighboring gene leucine rich repeats and transmembrane domains 2 Neighboring gene uncharacterized LOC114671024 Neighboring gene calcium voltage-gated channel subunit alpha1 C Neighboring gene uncharacterized LOC114670763 Neighboring gene uncharacterized LOC114670762

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables enzyme activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in deadenylation-dependent decapping of nuclear-transcribed mRNA IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in deadenylation-independent decapping of nuclear-transcribed mRNA IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of catalytic activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in P-body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mRNA-decapping enzyme 1B
    Names
    DCP1 decapping enzyme homolog B
    XP_015006259.1
    XP_015006260.1
    XP_028684988.1
    XP_028684989.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      2022035..2089091 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028829155.1 → XP_028684988.1  mRNA-decapping enzyme 1B isoform X2

      UniProtKB/TrEMBL
      F7GS64, H9F362, H9Z220
      Related
      ENSMMUP00000014403.3, ENSMMUT00000015373.4
      Conserved Domains (2) summary
      cd09804
      Location:16 → 131
      Dcp1; mRNA decapping enzyme 1 (Dcp1)
      pfam16741
      Location:574 → 592
      mRNA_decap_C; mRNA-decapping enzyme C-terminus

    2. XM_028829156.1 → XP_028684989.1  mRNA-decapping enzyme 1B isoform X3

      UniProtKB/TrEMBL
      H9F362
      Conserved Domains (2) summary
      pfam16741
      Location:500 → 542
      mRNA_decap_C; mRNA-decapping enzyme C-terminus
      cl17171
      Location:1 → 57
      PH-like; Pleckstrin homology-like domain

    3. XM_015150773.2 → XP_015006259.1  mRNA-decapping enzyme 1B isoform X1

      UniProtKB/TrEMBL
      A0A5F8A4V4, H9F362, H9Z220
      Related
      ENSMMUP00000072396.1, ENSMMUT00000090880.1
      Conserved Domains (3) summary
      cd09804
      Location:16 → 131
      Dcp1; mRNA decapping enzyme 1 (Dcp1)
      PHA03247
      Location:321 → 576
      PHA03247; large tegument protein UL36; Provisional
      pfam16741
      Location:574 → 616
      mRNA_decap_C; mRNA-decapping enzyme C-terminus

    4. XM_015150774.2 → XP_015006260.1  mRNA-decapping enzyme 1B isoform X4

      UniProtKB/TrEMBL
      H9F362, H9Z220
      Conserved Domains (1) summary
      cd09804
      Location:16 → 131
      Dcp1; mRNA decapping enzyme 1 (Dcp1)
    Nucleotide Protein
    Heading Accession and Version

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