U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    HERPUD1 homocysteine inducible ER protein with ubiquitin like domain 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 703210, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    HERPUD1provided by VGNC
    Official Full Name
    homocysteine inducible ER protein with ubiquitin like domain 1provided by VGNC
    Primary source
    VGNC:VGNC:73163
    See related
    Ensembl:ENSMMUG00000019189
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See HERPUD1 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (44168769..44181476)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (41102112..41114805)

    Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene microRNA mir-7181 Neighboring gene solute carrier family 12 member 3 Neighboring gene 40S ribosomal protein S24 pseudogene Neighboring gene cholesteryl ester transfer protein Neighboring gene NLR family CARD domain containing 5 Neighboring gene cilia- and flagella-associated protein 69-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transmembrane transporter binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in endoplasmic reticulum calcium ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endoplasmic reticulum unfolded protein response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041773.1 Reference Mmul_10 Primary Assembly

      Range
      44168769..44181476
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001095112.3 → XP_001095112.2  homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein isoform X1

      See identical proteins and their annotated locations for XP_001095112.2

      UniProtKB/TrEMBL
      A0A1D5Q691, A0A8J8YRV6, G7NPT4, H9YXM6
      Related
      ENSMMUP00000043557.2, ENSMMUT00000066304.2
      Conserved Domains (2) summary
      cd01790
      Location:67 → 145
      Herp_N; Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain protein
      smart00213
      Location:68 → 144
      UBQ; Ubiquitin homologues

    2. XM_015126223.1 → XP_014981709.1  homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein isoform X2

      Conserved Domains (2) summary
      cd01790
      Location:67 → 145
      Herp_N; Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain protein
      smart00213
      Location:68 → 144
      UBQ; Ubiquitin homologues
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.