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    AKIRIN1 akirin 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 718520, updated on 17-Aug-2024

    Summary

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    Official Symbol
    AKIRIN1provided by VGNC
    Official Full Name
    akirin 1provided by VGNC
    Primary source
    VGNC:VGNC:99841
    See related
    Ensembl:ENSMMUG00000009373
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See AKIRIN1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (185587881..185601498, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (38193673..38207274)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene microtubule actin crosslinking factor 1 Neighboring gene U6 spliceosomal RNA Neighboring gene NADH:ubiquinone oxidoreductase subunit S5 Neighboring gene eukaryotic translation initiation factor 1-like Neighboring gene U6 spliceosomal RNA Neighboring gene rhomboid like 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription coregulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in myoblast migration involved in skeletal muscle regeneration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of skeletal muscle satellite cell proliferation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of lamellipodium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of macrophage chemotaxis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of myoblast differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of chromatin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    akirin-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      185587881..185601498 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015135822.2 → XP_014991308.1  akirin-1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5RCN8, H9FZT7
      Related
      ENSMMUP00000058080.2, ENSMMUT00000066003.2
      Conserved Domains (1) summary
      cd22243
      Location:2 → 193
      akirin-1

    2. XM_015135823.2 → XP_014991309.1  akirin-1 isoform X2

      Conserved Domains (1) summary
      cl41779
      Location:2 → 166
      akirin
    Nucleotide Protein
    Heading Accession and Version

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