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    TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 699196, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TANC1provided by VGNC
    Official Full Name
    tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1provided by VGNC
    Primary source
    VGNC:VGNC:78238
    See related
    Ensembl:ENSMMUG00000006180
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TANC1 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    30
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (46006497..46272022)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (45666937..45932282)

    Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene death associated protein like 1 Neighboring gene U2 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene glutathione S-transferase Mu 3-like Neighboring gene WD repeat, sterile alpha motif and U-box domain containing 1 Neighboring gene bromodomain adjacent to zinc finger domain 2B Neighboring gene uncharacterized LOC106992593 Neighboring gene F-actin-capping protein subunit alpha-1 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of postsynapse organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in glutamatergic synapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein TANC1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041765.1 Reference Mmul_10 Primary Assembly

      Range
      46006497..46272022
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028830727.1 → XP_028686560.1  protein TANC1 isoform X3

      UniProtKB/TrEMBL
      G7N853
      Related
      ENSMMUP00000066460.1, ENSMMUT00000093443.1
      Conserved Domains (6) summary
      PHA03095
      Location:899 → 1259
      PHA03095; ankyrin-like protein; Provisional
      PHA03307
      Location:25 → 319
      PHA03307; transcriptional regulator ICP4; Provisional
      COG0457
      Location:1255 → 1409
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:1285 → 1310
      TPR; TPR repeat [structural motif]
      sd00045
      Location:1138 → 1168
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:1109 → 1201
      Ank_2; Ankyrin repeats (3 copies)

    2. XM_001093218.3 → XP_001093218.2  protein TANC1 isoform X1

      UniProtKB/TrEMBL
      F7HQW1, G7N853, H9G142
      Related
      ENSMMUP00000075092.1, ENSMMUT00000096406.1
      Conserved Domains (6) summary
      PHA03095
      Location:906 → 1266
      PHA03095; ankyrin-like protein; Provisional
      PHA03307
      Location:25 → 319
      PHA03307; transcriptional regulator ICP4; Provisional
      COG0457
      Location:1262 → 1416
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:1292 → 1317
      TPR; TPR repeat [structural motif]
      sd00045
      Location:1145 → 1175
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:1116 → 1208
      Ank_2; Ankyrin repeats (3 copies)

    3. XM_028830726.1 → XP_028686559.1  protein TANC1 isoform X2

      UniProtKB/TrEMBL
      A0A1D5RFW1
      Related
      ENSMMUP00000059205.2, ENSMMUT00000059112.2
      Conserved Domains (6) summary
      PHA03095
      Location:904 → 1264
      PHA03095; ankyrin-like protein; Provisional
      PHA03307
      Location:23 → 317
      PHA03307; transcriptional regulator ICP4; Provisional
      COG0457
      Location:1260 → 1414
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:1290 → 1315
      TPR; TPR repeat [structural motif]
      sd00045
      Location:1143 → 1173
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:1114 → 1206
      Ank_2; Ankyrin repeats (3 copies)

    4. XM_015110194.2 → XP_014965680.2  protein TANC1 isoform X4

      UniProtKB/TrEMBL
      A0A1D5QB20
      Conserved Domains (5) summary
      PHA03095
      Location:800 → 1160
      PHA03095; ankyrin-like protein; Provisional
      COG0457
      Location:1156 → 1310
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:1186 → 1211
      TPR; TPR repeat [structural motif]
      sd00045
      Location:1039 → 1069
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:1010 → 1102
      Ank_2; Ankyrin repeats (3 copies)

    5. XM_028830728.1 → XP_028686561.1  protein TANC1 isoform X4

      UniProtKB/TrEMBL
      A0A1D5QB20
      Conserved Domains (5) summary
      PHA03095
      Location:800 → 1160
      PHA03095; ankyrin-like protein; Provisional
      COG0457
      Location:1156 → 1310
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:1186 → 1211
      TPR; TPR repeat [structural motif]
      sd00045
      Location:1039 → 1069
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:1010 → 1102
      Ank_2; Ankyrin repeats (3 copies)

    6. XM_028830729.1 → XP_028686562.1  protein TANC1 isoform X5

      UniProtKB/TrEMBL
      A0A1D5QB20
      Conserved Domains (5) summary
      PHA03095
      Location:744 → 1104
      PHA03095; ankyrin-like protein; Provisional
      COG0457
      Location:1100 → 1254
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:1130 → 1155
      TPR; TPR repeat [structural motif]
      sd00045
      Location:983 → 1013
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:954 → 1046
      Ank_2; Ankyrin repeats (3 copies)

    7. XM_028830730.1 → XP_028686563.1  protein TANC1 isoform X6

      UniProtKB/TrEMBL
      A0A1D5QB20
      Conserved Domains (5) summary
      PHA03095
      Location:742 → 1102
      PHA03095; ankyrin-like protein; Provisional
      COG0457
      Location:1098 → 1252
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:1128 → 1153
      TPR; TPR repeat [structural motif]
      sd00045
      Location:981 → 1011
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:952 → 1044
      Ank_2; Ankyrin repeats (3 copies)
    Nucleotide Protein
    Heading Accession and Version

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