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    CLDN18 claudin 18 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 716628, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CLDN18provided by VGNC
    Official Full Name
    claudin 18provided by VGNC
    Primary source
    VGNC:VGNC:71248
    Locus tag
    EGK_12074
    See related
    Ensembl:ENSMMUG00000009636
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CLDN18 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (40142704..40177652)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (163946172..163981688, complement)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106997106 Neighboring gene heat shock cognate 71 kDa protein pseudogene Neighboring gene DAZ interacting zinc finger protein 1 like Neighboring gene keratin, type II cytoskeletal 8 pseudogene Neighboring gene alpha-1,4-N-acetylglucosaminyltransferase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural molecule activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in bicellular tight junction assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in bicellular tight junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    claudin-18

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      40142704..40177652
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001114708.4 → XP_001114708.1  claudin-18 isoform X2

      See identical proteins and their annotated locations for XP_001114708.1

      UniProtKB/TrEMBL
      F6YQZ9
      Related
      ENSMMUP00000012605.4, ENSMMUT00000013453.4
      Conserved Domains (1) summary
      cl21598
      Location:9 → 191
      PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

    2. XM_015132093.2 → XP_014987579.1  claudin-18 isoform X1

      UniProtKB/TrEMBL
      A0A8J8XC18, F6YQY3, G7MJP6
      Related
      ENSMMUP00000012607.2, ENSMMUT00000013455.4
      Conserved Domains (1) summary
      cl21598
      Location:7 → 191
      PMP22_Claudin; PMP-22/EMP/MP20/Claudin family
    Nucleotide Protein
    Heading Accession and Version

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