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    ARID3A AT-rich interaction domain 3A [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 704435, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ARID3Aprovided by VGNC
    Official Full Name
    AT-rich interaction domain 3Aprovided by VGNC
    Primary source
    VGNC:VGNC:69930
    See related
    Ensembl:ENSMMUG00000002278
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ARID3A in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (696397..743864)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (702064..742568)

    Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene R3H domain containing 4 Neighboring gene KISS1 receptor Neighboring gene WD repeat domain 18 Neighboring gene glutamate ionotropic receptor NMDA type subunit 3B Neighboring gene transmembrane protein 259

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    AT-rich interactive domain-containing protein 3A
    Names
    AT rich interactive domain 3A (BRIGHT-like)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041772.1 Reference Mmul_10 Primary Assembly

      Range
      696397..743864
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028839837.1 → XP_028695670.1  AT-rich interactive domain-containing protein 3A isoform X1

      UniProtKB/TrEMBL
      F7B3V4, G7NL36
      Conserved Domains (1) summary
      cd16878
      Location:217 → 349
      ARID_ARID3A; ARID/BRIGHT DNA binding domain of AT-rich interactive domain-containing protein 3A (ARID3A) and similar proteins

    2. XM_028839838.1 → XP_028695671.1  AT-rich interactive domain-containing protein 3A isoform X1

      UniProtKB/TrEMBL
      F7B3V4, G7NL36
      Related
      ENSMMUP00000003048.4, ENSMMUT00000003228.4
      Conserved Domains (1) summary
      cd16878
      Location:217 → 349
      ARID_ARID3A; ARID/BRIGHT DNA binding domain of AT-rich interactive domain-containing protein 3A (ARID3A) and similar proteins

    3. XM_028839836.1 → XP_028695669.1  AT-rich interactive domain-containing protein 3A isoform X1

      UniProtKB/TrEMBL
      F7B3V4, G7NL36
      Conserved Domains (1) summary
      cd16878
      Location:217 → 349
      ARID_ARID3A; ARID/BRIGHT DNA binding domain of AT-rich interactive domain-containing protein 3A (ARID3A) and similar proteins

    4. XM_028839839.1 → XP_028695672.1  AT-rich interactive domain-containing protein 3A isoform X2

      Conserved Domains (1) summary
      cd16867
      Location:197 → 311
      ARID_ARID3; ARID/BRIGHT DNA binding domain of AT-rich interactive domain-containing proteins ARID3A, ARID3B, ARID3C, dead ringer (Dri) from Drosophila melanogaster, and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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