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    ZNF789 zinc finger protein 789 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 718725, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ZNF789provided by VGNC
    Official Full Name
    zinc finger protein 789provided by VGNC
    Primary source
    VGNC:VGNC:79668
    Locus tag
    EGK_13491
    See related
    Ensembl:ENSMMUG00000020139
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human all
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    Genomic context

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    See ZNF789 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (41585360..41600908)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (124912894..124929569)

    Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene uncharacterized LOC106997571 Neighboring gene zinc finger protein 394 Neighboring gene uncharacterized LOC114676873 Neighboring gene zinc finger with KRAB and SCAN domains 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein 789

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041756.1 Reference Mmul_10 Primary Assembly

      Range
      41585360..41600908
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015134382.2 → XP_014989868.1  zinc finger protein 789 isoform X2

      UniProtKB/TrEMBL
      F6TZR4
      Related
      ENSMMUP00000026511.3, ENSMMUT00000028331.4
      Conserved Domains (5) summary
      smart00349
      Location:49 → 89
      KRAB; krueppel associated box
      COG5048
      Location:253 → 313
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:259 → 279
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:49 → 88
      KRAB; KRAB box
      pfam13465
      Location:271 → 296
      zf-H2C2_2; Zinc-finger double domain

    2. XM_015134386.2 → XP_014989872.1  zinc finger protein 789 isoform X8

      Conserved Domains (1) summary
      smart00349
      Location:11 → 52
      KRAB; krueppel associated box

    3. XM_015134380.2 → XP_014989866.1  zinc finger protein 789 isoform X3

      UniProtKB/TrEMBL
      G7MNR4
      Conserved Domains (3) summary
      smart00349
      Location:11 → 71
      KRAB; krueppel associated box
      COG5048
      Location:253 → 313
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:259 → 279
      ZF_C2H2; C2H2 Zn finger [structural motif]

    4. XM_028845561.1 → XP_028701394.1  zinc finger protein 789 isoform X5

      Conserved Domains (3) summary
      COG5048
      Location:215 → 275
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:221 → 241
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:10 → 51
      KRAB; KRAB box

    5. XM_015134383.2 → XP_014989869.1  zinc finger protein 789 isoform X4

      UniProtKB/TrEMBL
      A0A1D5RBW0
      Related
      ENSMMUP00000057802.2, ENSMMUT00000073064.2
      Conserved Domains (5) summary
      smart00349
      Location:5 → 65
      KRAB; krueppel associated box
      COG5048
      Location:247 → 307
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:253 → 273
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:5 → 44
      KRAB; KRAB box
      pfam13465
      Location:265 → 290
      zf-H2C2_2; Zinc-finger double domain

    6. XM_001111805.4 → XP_001111805.3  zinc finger protein 789 isoform X1

      Related
      ENSMMUP00000069876.1, ENSMMUT00000104861.1
      Conserved Domains (5) summary
      smart00349
      Location:49 → 109
      KRAB; krueppel associated box
      COG5048
      Location:291 → 351
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:297 → 317
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:49 → 88
      KRAB; KRAB box
      pfam13465
      Location:309 → 334
      zf-H2C2_2; Zinc-finger double domain

    7. XM_028845560.1 → XP_028701393.1  zinc finger protein 789 isoform X3

      UniProtKB/TrEMBL
      G7MNR4
      Conserved Domains (3) summary
      smart00349
      Location:11 → 71
      KRAB; krueppel associated box
      COG5048
      Location:253 → 313
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:259 → 279
      ZF_C2H2; C2H2 Zn finger [structural motif]

    8. XM_015134385.2 → XP_014989871.1  zinc finger protein 789 isoform X7

      Conserved Domains (2) summary
      smart00349
      Location:49 → 90
      KRAB; krueppel associated box
      pfam01352
      Location:49 → 88
      KRAB; KRAB box

    9. XM_028845562.1 → XP_028701395.1  zinc finger protein 789 isoform X6

      Conserved Domains (3) summary
      COG5048
      Location:208 → 268
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:214 → 234
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cl02581
      Location:6 → 26
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box

    RNA

    1. XR_003727999.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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