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    FHL5 four and a half LIM domains 5 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 704568, updated on 17-Aug-2024

    Summary

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    Official Symbol
    FHL5provided by VGNC
    Official Full Name
    four and a half LIM domains 5provided by VGNC
    Primary source
    VGNC:VGNC:72521
    Locus tag
    EGK_15179
    See related
    Ensembl:ENSMMUG00000012621
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See FHL5 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (76708245..76762199, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (95003254..95055934)

    Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114677538 Neighboring gene 40S ribosomal protein S7 pseudogene Neighboring gene U4 spliceosomal RNA Neighboring gene uncharacterized LOC106998046 Neighboring gene UFM1 specific ligase 1 Neighboring gene uncharacterized LOC114677394

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription coactivator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Z disc IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    four and a half LIM domains protein 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041757.1 Reference Mmul_10 Primary Assembly

      Range
      76708245..76762199 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015136964.2 → XP_014992450.1  four and a half LIM domains protein 5

      UniProtKB/TrEMBL
      A0A8J8XJ17, F7F0V6, G7MPY4
      Conserved Domains (5) summary
      cd09343
      Location:37 → 95
      LIM1_FHL; The first LIM domain of Four and a half LIM domains protein (FHL)
      cd09346
      Location:163 → 214
      LIM3_FHL; The third LIM domain of Four and a half LIM domains protein (FHL)
      cd09347
      Location:222 → 277
      LIM4_FHL; The fourth LIM domain of Four and a half LIM domains protein (FHL)
      cd09428
      Location:102 → 155
      LIM2_FHL5; The second LIM domain of Four and a half LIM domains protein 5 (FHL5)
      cl02475
      Location:6 → 34
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers

    2. XM_015136963.2 → XP_014992449.1  four and a half LIM domains protein 5

      UniProtKB/TrEMBL
      A0A8J8XJ17, F7F0V6, G7MPY4
      Conserved Domains (5) summary
      cd09343
      Location:37 → 95
      LIM1_FHL; The first LIM domain of Four and a half LIM domains protein (FHL)
      cd09346
      Location:163 → 214
      LIM3_FHL; The third LIM domain of Four and a half LIM domains protein (FHL)
      cd09347
      Location:222 → 277
      LIM4_FHL; The fourth LIM domain of Four and a half LIM domains protein (FHL)
      cd09428
      Location:102 → 155
      LIM2_FHL5; The second LIM domain of Four and a half LIM domains protein 5 (FHL5)
      cl02475
      Location:6 → 34
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers

    3. XM_001100593.4 → XP_001100593.1  four and a half LIM domains protein 5

      See identical proteins and their annotated locations for XP_001100593.1

      UniProtKB/TrEMBL
      A0A8J8XJ17, F7F0V6, G7MPY4
      Conserved Domains (5) summary
      cd09343
      Location:37 → 95
      LIM1_FHL; The first LIM domain of Four and a half LIM domains protein (FHL)
      cd09346
      Location:163 → 214
      LIM3_FHL; The third LIM domain of Four and a half LIM domains protein (FHL)
      cd09347
      Location:222 → 277
      LIM4_FHL; The fourth LIM domain of Four and a half LIM domains protein (FHL)
      cd09428
      Location:102 → 155
      LIM2_FHL5; The second LIM domain of Four and a half LIM domains protein 5 (FHL5)
      cl02475
      Location:6 → 34
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers

    4. XM_001100497.4 → XP_001100497.1  four and a half LIM domains protein 5

      See identical proteins and their annotated locations for XP_001100497.1

      UniProtKB/TrEMBL
      A0A8J8XJ17, F7F0V6, G7MPY4
      Related
      ENSMMUP00000033333.1, ENSMMUT00000040266.3
      Conserved Domains (5) summary
      cd09343
      Location:37 → 95
      LIM1_FHL; The first LIM domain of Four and a half LIM domains protein (FHL)
      cd09346
      Location:163 → 214
      LIM3_FHL; The third LIM domain of Four and a half LIM domains protein (FHL)
      cd09347
      Location:222 → 277
      LIM4_FHL; The fourth LIM domain of Four and a half LIM domains protein (FHL)
      cd09428
      Location:102 → 155
      LIM2_FHL5; The second LIM domain of Four and a half LIM domains protein 5 (FHL5)
      cl02475
      Location:6 → 34
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
    Nucleotide Protein
    Heading Accession and Version

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