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    ZGRF1 zinc finger GRF-type containing 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 703497, updated on 5-Mar-2024

    Summary

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    Gene symbol
    ZGRF1
    Gene description
    zinc finger GRF-type containing 1
    See related
    Ensembl:ENSMMUG00000023591
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ZGRF1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    29
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (110821116..110906012, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (111472174..111557651, complement)

    Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene TOX high mobility group box family member 4-like Neighboring gene uncharacterized LOC114678382 Neighboring gene neurogenin 2 Neighboring gene La ribonucleoprotein 7, transcriptional regulator Neighboring gene microRNA mir-302d Neighboring gene microRNA mir-367

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in double-strand break repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in site of double-strand break IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein ZGRF1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041758.1 Reference Mmul_10 Primary Assembly

      Range
      110821116..110906012 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015139054.2 → XP_014994540.2  protein ZGRF1 isoform X4

      UniProtKB/TrEMBL
      A0A5F7ZY82
      Conserved Domains (4) summary
      TIGR00376
      Location:1421 → 1833
      TIGR00376; DNA helicase, putative
      pfam06839
      Location:1119 → 1163
      zf-GRF; GRF zinc finger
      pfam10382
      Location:4 → 73
      DUF2439; Protein of unknown function (DUF2439)
      pfam13087
      Location:1627 → 1811
      AAA_12; AAA domain

    2. XM_015139053.2 → XP_014994539.2  protein ZGRF1 isoform X3

      UniProtKB/TrEMBL
      A0A5F7ZY82, A0A5F8AT44
      Related
      ENSMMUP00000080992.1, ENSMMUT00000104584.1
      Conserved Domains (4) summary
      TIGR00376
      Location:1468 → 1880
      TIGR00376; DNA helicase, putative
      pfam06839
      Location:1166 → 1210
      zf-GRF; GRF zinc finger
      pfam10382
      Location:4 → 73
      DUF2439; Protein of unknown function (DUF2439)
      pfam13087
      Location:1674 → 1858
      AAA_12; AAA domain

    3. XM_015139049.2 → XP_014994535.2  protein ZGRF1 isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZY82, F7HFN8
      Conserved Domains (4) summary
      TIGR00376
      Location:1621 → 2033
      TIGR00376; DNA helicase, putative
      pfam06839
      Location:1319 → 1363
      zf-GRF; GRF zinc finger
      pfam10382
      Location:4 → 73
      DUF2439; Protein of unknown function (DUF2439)
      pfam13087
      Location:1827 → 2011
      AAA_12; AAA domain

    4. XM_015139055.2 → XP_014994541.2  protein ZGRF1 isoform X5

      UniProtKB/TrEMBL
      F7HFN4
      Related
      ENSMMUP00000031059.4, ENSMMUT00000033189.4
      Conserved Domains (4) summary
      TIGR00376
      Location:1649 → 2061
      TIGR00376; DNA helicase, putative
      pfam06839
      Location:1347 → 1391
      zf-GRF; GRF zinc finger
      pfam10382
      Location:4 → 73
      DUF2439; Protein of unknown function (DUF2439)
      pfam13087
      Location:1855 → 2039
      AAA_12; AAA domain

    5. XM_015139050.2 → XP_014994536.2  protein ZGRF1 isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZY82, F7HFN8
      Related
      ENSMMUP00000031058.4, ENSMMUT00000033188.4
      Conserved Domains (4) summary
      TIGR00376
      Location:1621 → 2033
      TIGR00376; DNA helicase, putative
      pfam06839
      Location:1319 → 1363
      zf-GRF; GRF zinc finger
      pfam10382
      Location:4 → 73
      DUF2439; Protein of unknown function (DUF2439)
      pfam13087
      Location:1827 → 2011
      AAA_12; AAA domain

    6. XM_015139051.2 → XP_014994537.2  protein ZGRF1 isoform X2

      UniProtKB/TrEMBL
      A0A5F7Z8G9, A0A5F7ZY82
      Related
      ENSMMUP00000061422.1, ENSMMUT00000080629.1
      Conserved Domains (4) summary
      TIGR00376
      Location:1563 → 1975
      TIGR00376; DNA helicase, putative
      pfam06839
      Location:1261 → 1305
      zf-GRF; GRF zinc finger
      pfam10382
      Location:4 → 73
      DUF2439; Protein of unknown function (DUF2439)
      pfam13087
      Location:1769 → 1953
      AAA_12; AAA domain

    RNA

    1. XR_003729757.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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