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    BRD3 bromodomain containing 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 713107, updated on 17-Aug-2024

    Summary

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    Official Symbol
    BRD3provided by VGNC
    Official Full Name
    bromodomain containing 3provided by VGNC
    Primary source
    VGNC:VGNC:70281
    Locus tag
    EGK_07225
    See related
    Ensembl:ENSMMUG00000005463
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See BRD3 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (4180909..4219334)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (4291343..4330130)

    Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114672697 Neighboring gene ADP-ribosylation factor 4-like Neighboring gene uncharacterized LOC114672698 Neighboring gene BRD3 opposite strand

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables lysine-acetylated histone binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chromatin remodeling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of chromatin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    bromodomain-containing protein 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001194118.2 → NP_001181047.1  bromodomain-containing protein 3

      See identical proteins and their annotated locations for NP_001181047.1

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02000132
      UniProtKB/TrEMBL
      A0A8J8YRI5, F6YTC0, F7G2U4, F7G2U9, G7NF93
      Related
      ENSMMUP00000007223.3, ENSMMUT00000007691.4
      Conserved Domains (3) summary
      cd05497
      Location:34 → 140
      Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
      cd05498
      Location:311 → 412
      Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
      pfam17035
      Location:571 → 635
      BET; Bromodomain extra-terminal - transcription regulation

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041768.1 Reference Mmul_10 Primary Assembly

      Range
      4180909..4219334
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028834368.1 → XP_028690201.1  bromodomain-containing protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A8J8YRI5, F6YTC0, F7G2U4, F7G2U9, G7NF93
      Related
      ENSMMUP00000064703.1, ENSMMUT00000079730.1
      Conserved Domains (3) summary
      cd05497
      Location:34 → 140
      Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
      cd05498
      Location:311 → 412
      Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
      pfam17035
      Location:571 → 635
      BET; Bromodomain extra-terminal - transcription regulation

    2. XM_028834370.1 → XP_028690203.1  bromodomain-containing protein 3 isoform X2

      Conserved Domains (3) summary
      cd05497
      Location:34 → 140
      Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
      cd05498
      Location:311 → 412
      Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
      pfam17035
      Location:571 → 635
      BET; Bromodomain extra-terminal - transcription regulation

    3. XM_028834369.1 → XP_028690202.1  bromodomain-containing protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A8J8YRI5, F6YTC0, F7G2U4, F7G2U9, G7NF93
      Related
      ENSMMUP00000061213.1, ENSMMUT00000110306.1
      Conserved Domains (3) summary
      cd05497
      Location:34 → 140
      Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
      cd05498
      Location:311 → 412
      Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
      pfam17035
      Location:571 → 635
      BET; Bromodomain extra-terminal - transcription regulation

    4. XM_015116407.2 → XP_014971893.1  bromodomain-containing protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A8J8YRI5, F6YTC0, F7G2U4, F7G2U9, G7NF93
      Conserved Domains (3) summary
      cd05497
      Location:34 → 140
      Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
      cd05498
      Location:311 → 412
      Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
      pfam17035
      Location:571 → 635
      BET; Bromodomain extra-terminal - transcription regulation
    Nucleotide Protein
    Heading Accession and Version

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