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    SPEF2 sperm flagellar 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 703621, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SPEF2provided by VGNC
    Official Full Name
    sperm flagellar 2provided by VGNC
    Primary source
    VGNC:VGNC:82243
    See related
    Ensembl:ENSMMUG00000018739
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SPEF2 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    42
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (35397282..35587621)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (36050902..36148187)

    Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114678768 Neighboring gene prolactin receptor Neighboring gene uncharacterized LOC106998707 Neighboring gene small nucleolar RNA U3 Neighboring gene uncharacterized LOC106998709 Neighboring gene U7 small nuclear RNA Neighboring gene interleukin 7 receptor Neighboring gene calcyphosine like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in sperm axoneme assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in manchette IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in sperm midpiece IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sperm flagellar protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041759.1 Reference Mmul_10 Primary Assembly

      Range
      35397282..35587621
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015139860.2 → XP_014995346.2  sperm flagellar protein 2 isoform X8

      UniProtKB/TrEMBL
      F6Y3A3, G7MV34
      Related
      ENSMMUP00000024660.4, ENSMMUT00000026344.4
      Conserved Domains (3) summary
      pfam06294
      Location:8 → 97
      CH_2; CH-like domain in sperm protein
      pfam17380
      Location:101 → 421
      DUF5401; Family of unknown function (DUF5401)
      cl17190
      Location:686 → 868
      NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...

    2. XM_015139859.2 → XP_014995345.2  sperm flagellar protein 2 isoform X6

      UniProtKB/TrEMBL
      G7MV34
      Conserved Domains (3) summary
      pfam06294
      Location:8 → 97
      CH_2; CH-like domain in sperm protein
      pfam17380
      Location:101 → 421
      DUF5401; Family of unknown function (DUF5401)
      cl17190
      Location:686 → 868
      NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...

    3. XM_028849383.1 → XP_028705216.1  sperm flagellar protein 2 isoform X7

      UniProtKB/TrEMBL
      G7MV34
      Conserved Domains (3) summary
      pfam06294
      Location:8 → 97
      CH_2; CH-like domain in sperm protein
      pfam17380
      Location:101 → 421
      DUF5401; Family of unknown function (DUF5401)
      cl17190
      Location:681 → 863
      NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...

    4. XM_028849382.1 → XP_028705215.1  sperm flagellar protein 2 isoform X5

      Conserved Domains (4) summary
      smart00597
      Location:1510 → 1579
      ZnF_TTF; zinc finger in transposases and transcription factors
      pfam06294
      Location:8 → 97
      CH_2; CH-like domain in sperm protein
      pfam17380
      Location:101 → 421
      DUF5401; Family of unknown function (DUF5401)
      cl17190
      Location:686 → 868
      NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...

    5. XM_028849378.1 → XP_028705211.1  sperm flagellar protein 2 isoform X1

      Conserved Domains (4) summary
      smart00597
      Location:1510 → 1579
      ZnF_TTF; zinc finger in transposases and transcription factors
      pfam06294
      Location:8 → 97
      CH_2; CH-like domain in sperm protein
      pfam17380
      Location:101 → 421
      DUF5401; Family of unknown function (DUF5401)
      cl17190
      Location:686 → 868
      NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...

    6. XM_028849380.1 → XP_028705213.1  sperm flagellar protein 2 isoform X3

      Conserved Domains (4) summary
      smart00597
      Location:1485 → 1554
      ZnF_TTF; zinc finger in transposases and transcription factors
      pfam06294
      Location:8 → 97
      CH_2; CH-like domain in sperm protein
      pfam17380
      Location:101 → 421
      DUF5401; Family of unknown function (DUF5401)
      cl17190
      Location:686 → 868
      NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...

    7. XM_028849379.1 → XP_028705212.1  sperm flagellar protein 2 isoform X2

      Conserved Domains (4) summary
      smart00597
      Location:1505 → 1574
      ZnF_TTF; zinc finger in transposases and transcription factors
      pfam06294
      Location:8 → 97
      CH_2; CH-like domain in sperm protein
      pfam17380
      Location:101 → 421
      DUF5401; Family of unknown function (DUF5401)
      cl17190
      Location:681 → 863
      NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...

    8. XM_028849384.1 → XP_028705217.1  sperm flagellar protein 2 isoform X9

      UniProtKB/TrEMBL
      G7MV34
      Conserved Domains (3) summary
      pfam06294
      Location:8 → 97
      CH_2; CH-like domain in sperm protein
      pfam17380
      Location:101 → 421
      DUF5401; Family of unknown function (DUF5401)
      cl17190
      Location:686 → 868
      NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...

    9. XM_028849381.1 → XP_028705214.1  sperm flagellar protein 2 isoform X4

      Conserved Domains (4) summary
      smart00597
      Location:1453 → 1522
      ZnF_TTF; zinc finger in transposases and transcription factors
      pfam06294
      Location:8 → 97
      CH_2; CH-like domain in sperm protein
      pfam17380
      Location:127 → 364
      DUF5401; Family of unknown function (DUF5401)
      cl17190
      Location:629 → 811
      NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...
    Nucleotide Protein
    Heading Accession and Version

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